RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CGAP01215 116 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 LOXL3P58215 753 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 RNASEKQ6P5S7 137 aaKnown RBP11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 TXNDC17Q9BRA2 123 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 A6NNC1 897 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 SIAH2O43255 324 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 HIST1H1BP16401 226 aaKnown RBP11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 C3orf36Q3SXR2 165 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 ANAPC16Q96DE5 110 aa11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 FGF23Q9GZV9 251 aaPredicted RBP11.68□□□□□ -0.54
SHROOM1-203ENST00000378679 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 HINT1P49773 126 aaPredicted RBP11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 SRSF12Q8WXF0 261 aaKnown RBP11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 ARHGAP21Q5T5U3 1957 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 SNURFLB1AK76 121 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 OR2J3O76001 311 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 GATA4P43694 442 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 SRP19P09132 144 aaKnown RBP11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 RPEL1Q2QD12 228 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 OR10W1Q8NGF6 305 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 SRD5A3Q9H8P0 318 aa11.67□□□□□ -0.54
SHROOM1-203ENST00000378679 TRAV3A0A0B4J244 114 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 CRYBB3P26998 211 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 COTL1Q14019 142 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 ZNF585BQ52M93 769 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 IL4P05112 153 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 GCHFRP30047 84 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 TFPI2P48307 235 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 TAS2R60P59551 318 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 CYP2G1PQ6ZSU1 146 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 SSC4DQ8WTU2 575 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 CACNG8Q8WXS5 425 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 ZNRD1Q9P1U0 126 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 SELENOKQ9Y6D0 94 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 CD5P06127 495 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 CFHR2P36980 270 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 TNFRSF14Q92956 283 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 RABAC1Q9UI14 185 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
SHROOM1-203ENST00000378679 NBR2O15453 112 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 P01737 135 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 GRNP28799 593 aaKnown RBP11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 Q8NFD4 153 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 C19orf24Q9BVV8 132 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 PARLQ9H300 379 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 PRCDQ00LT1 54 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 MST1LQ2TV78 715 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 IGHV3OR16-13A0A075B7E8 117 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 IGHV3-74A0A0B4J1X5 117 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 J3KRW8 73 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 CSN3P07498 182 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 SRSF4Q08170 494 aaKnown RBP11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 WNT10AQ9GZT5 417 aa11.65□□□□□ -0.54
SHROOM1-203ENST00000378679 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 AGAP20933 346 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 KLRD1Q13241 179 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 ELOBQ15370 118 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 CTAG1AP78358 180 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 ZNF506Q5JVG8 444 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 SLC25A48Q6ZT89 311 aaKnown RBP11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 WDR83OSQ9Y284 106 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 LINC00305Q7Z4B0 112 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 PRNTQ86SH4 94 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 C14orf144Q96I85 54 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 TMSB15BA0A087X1C1 80 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 PGPEP1LA6NFU8 196 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 TMEM250H0YL14 139 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 BMPR1BO00238 502 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 Q6ZSR3 168 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 HIST1H2BLQ99880 126 aa11.64□□□□□ -0.55
SHROOM1-203ENST00000378679 TEX50A0A1B0GTY4 177 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 IGKV1-16P04430 117 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 MYOD1P15172 320 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 CBLN1P23435 193 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 KRTAP27-1Q3LI81 207 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 BET1LQ9NYM9 111 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 FOXA2Q9Y261 457 aaPredicted RBP11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 IGHV3OR16-8A0A075B7F1 116 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 SMAD7O15105 426 aaKnown RBP11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 ORM1P02763 201 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 NOL4LQ96MY1 436 aaPredicted RBP11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 USP9YO00507 2555 aaPredicted RBP11.63□□□□□ -0.55
SHROOM1-203ENST00000378679 TLN2Q9Y4G6 2542 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms