RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DNAH7Q8WXX0 4024 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 CEBPZOSA8MTT3 80 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 SULT1A3P0DMM9 295 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 SULT1A4P0DMN0 295 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 HTR2BP41595 481 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 LINC00322Q6ZN03 302 aaPredicted RBP12.6□□□□□ -0.39
HMGN4-201ENST00000377575 MUC7Q8TAX7 377 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 CITED4Q96RK1 184 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 GINS3Q9BRX5 216 aa12.6□□□□□ -0.39
HMGN4-201ENST00000377575 HEYLQ9NQ87 328 aaPredicted RBP12.6□□□□□ -0.39
HMGN4-201ENST00000377575 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 IGHV7-4-1A0A0J9YVY3 117 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 RBMY1BA6NDE4 496 aaKnown RBP12.59□□□□□ -0.39
HMGN4-201ENST00000377575 RBMY1EA6NEQ0 496 aaKnown RBP12.59□□□□□ -0.39
HMGN4-201ENST00000377575 RBMY1DP0C7P1 496 aaKnown RBP12.59□□□□□ -0.39
HMGN4-201ENST00000377575 BMI1P35226 326 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 SUPT4H1P63272 117 aaKnown RBP12.59□□□□□ -0.39
HMGN4-201ENST00000377575 ZNF600Q6ZNG1 722 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 TMED4Q7Z7H5 227 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 LGI3Q8N145 548 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 TMEM116Q8NCL8 245 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 SHPKQ9UHJ6 478 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 SMPXQ9UHP9 88 aa12.59□□□□□ -0.39
HMGN4-201ENST00000377575 TRAV14DV4A0A0A6YYC5 116 aa12.58□□□□□ -0.4
HMGN4-201ENST00000377575 OR4C46A6NHA9 309 aa12.58□□□□□ -0.4
HMGN4-201ENST00000377575 CCR6P51684 374 aa12.58□□□□□ -0.4
HMGN4-201ENST00000377575 SLC24A4Q8NFF2 622 aa12.58□□□□□ -0.4
HMGN4-201ENST00000377575 ZNF414Q96IQ9 312 aa12.58□□□□□ -0.4
HMGN4-201ENST00000377575 SLC25A21Q9BQT8 299 aaPredicted RBP12.58□□□□□ -0.4
HMGN4-201ENST00000377575 HIPK2Q9H2X6 1198 aa12.58□□□□□ -0.4
HMGN4-201ENST00000377575 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 CHEK1O14757 476 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 CLN5O75503 358 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 INPP1P49441 399 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 TMEM128Q5BJH2 165 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 NOXA1Q86UR1 476 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 OR4X1Q8NH49 305 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
HMGN4-201ENST00000377575 RHPN1-AS1Q9BWJ2 59 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 GGTLC1Q9BX51 225 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 SRRQ9GZT4 340 aa12.57□□□□□ -0.4
HMGN4-201ENST00000377575 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
HMGN4-201ENST00000377575 PUS1Q9Y606 427 aaKnown RBP eCLIP12.57□□□□□ -0.4
HMGN4-201ENST00000377575 NXPH3O95157 252 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 TMEM50AO95807 157 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 CD5P06127 495 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 TRIQKQ629K1 86 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 LYZL2Q7Z4W2 148 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 RNF2Q99496 336 aa12.56□□□□□ -0.4
HMGN4-201ENST00000377575 TRAV30A0A087WSZ9 112 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 LOC102724200A0A096LPH7 203 aaPredicted RBP12.55□□□□□ -0.4
HMGN4-201ENST00000377575 SLC25A4P12235 298 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 VAMP1P23763 118 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 NPY1RP25929 384 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 RBMS2Q15434 407 aaKnown RBP12.55□□□□□ -0.4
HMGN4-201ENST00000377575 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 FAM110AQ9BQ89 295 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 RETNQ9HD89 108 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 HSPB7Q9UBY9 170 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 NBEAL2Q6ZNJ1 2754 aa12.55□□□□□ -0.4
HMGN4-201ENST00000377575 KMT2CQ8NEZ4 4911 aaKnown RBP12.55□□□□□ -0.4
HMGN4-201ENST00000377575 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 A0A1B0GU03 582 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 LYL1P12980 280 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 OR1S1Q8NH92 325 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 DTD1Q8TEA8 209 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 TMEM231Q9H6L2 316 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
HMGN4-201ENST00000377575 MRPL36Q9P0J6 103 aaKnown RBP12.54□□□□□ -0.4
HMGN4-201ENST00000377575 NAP1L6A6NFF2 107 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 IFNA10P01566 189 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 OR1S2Q8NGQ3 325 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 METTL26Q96S19 204 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 VSIRQ9H7M9 311 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 U3KQ87 197 aa12.53□□□□□ -0.4
HMGN4-201ENST00000377575 IGHV3OR16-13A0A075B7E8 117 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 IGHV3-74A0A0B4J1X5 117 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 RND2P52198 227 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 APOC4P55056 127 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 CMC4P56277 68 aaPredicted RBP12.52□□□□□ -0.41
HMGN4-201ENST00000377575 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.41
HMGN4-201ENST00000377575 MLANAQ16655 118 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 CASC10Q5T4H9 136 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 PRSS54Q6PEW0 395 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 TCF24Q7RTU0 167 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms