RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 A0A1B0GU03 582 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 OOSP1A8MZH6 123 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 I3L521 148 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 UPK2O00526 184 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 KCNAB3O43448 404 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 FABP1P07148 127 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 CRYGBP07316 175 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 MYOD1P15172 320 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 NQO2P16083 231 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 CEACAM3P40198 252 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 EBI3Q14213 229 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 SMCO1Q147U7 214 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 PSG5Q15238 335 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 RTL8BQ17RB0 113 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 ODF3L2Q3SX64 289 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 DNLZQ5SXM8 178 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 GPR157Q5UAW9 335 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 OR4A47Q6IF82 309 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 PUSL1Q8N0Z8 303 aaKnown RBP2.81□□□□□ -1.96
MCF2-202ENST00000370573 Q8N6K4 173 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 DMBX1Q8NFW5 382 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 RNASE11Q8TAA1 199 aaKnown RBP2.81□□□□□ -1.96
MCF2-202ENST00000370573 PPP1R1CQ8WVI7 109 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 DPF1Q92782 380 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 FLYWCH2Q96CP2 140 aaKnown RBP2.81□□□□□ -1.96
MCF2-202ENST00000370573 OR51M1Q9H341 326 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 C11orf1Q9H5F2 150 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 PLSCR3Q9NRY6 295 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 CACNG5Q9UF02 275 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 NSG2Q9Y328 171 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 TET2Q6N021 2002 aaPredicted RBP2.81□□□□□ -1.96
MCF2-202ENST00000370573 MDFIC2A0A1B0GVS7 189 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 K7EPK0 472 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 FCN1O00602 326 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 CD5LO43866 347 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 MPC2O95563 127 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 TMEM50AO95807 157 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 HRASP01112 189 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 IGKV1D-33P01593 117 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 IGKV1-33P01594 117 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SAA1P0DJI8 122 aaPredicted RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 SLC25A6P12236 298 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 PSMB6P28072 239 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 NUP62P37198 522 aaPredicted RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 AKR1C2P52895 323 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 PAX9P55771 341 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SPCS3P61009 180 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 UBE2KP61086 200 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 CYCSP99999 105 aaKnown RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 PJVKQ0ZLH3 352 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 COTL1Q14019 142 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 AANATQ16613 207 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 LRRC37A5PQ49AS3 106 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 LAMTOR1Q6IAA8 161 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 H2BFWTQ7Z2G1 175 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 MMD2Q8IY49 270 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 FAM71E2Q8N5Q1 922 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 OR4C13Q8NGP0 309 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 OR1S1Q8NH92 325 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 C22orf15Q8WYQ4 148 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SMR3AQ99954 134 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 QTRT1Q9BXR0 403 aaKnown RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 MAGT1Q9H0U3 335 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 TMEM231Q9H6L2 316 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 OR5AC2Q9NZP5 309 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 NAV3Q8IVL0 2385 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 MTORP42345 2549 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 TEX50A0A1B0GTY4 177 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 A0A1B0GW64 132 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 L7N2F9 121 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 CHST1O43916 411 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 ATG12O94817 140 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 MOSP00540 346 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SLC25A4P12235 298 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 LGALS7P47929 136 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 OR2B8PP59922 312 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 ERVK-16P61578 105 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SSBP2P81877 361 aaPredicted RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 DEFB112Q30KQ8 113 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 RNF212Q495C1 297 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SPINK9Q5DT21 86 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 TEX261Q6UWH6 196 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 C9orf139Q6ZV77 190 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 GBGT1Q8N5D6 347 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 NPBQ8NG41 125 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 OR2T10Q8NGZ9 312 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 ASB13Q8WXK3 278 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 ZNF48Q96MX3 618 aaPredicted RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 SPIN2AQ99865 258 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 RNF5Q99942 180 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 SPIN2BQ9BPZ2 258 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 FBXL15Q9H469 300 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 RBKSQ9H477 322 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 TMEM14BQ9NUH8 114 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 BET1LQ9NYM9 111 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 RCL1Q9Y2P8 373 aaKnown RBP2.8□□□□□ -1.96
MCF2-202ENST00000370573 SIGLEC9Q9Y336 463 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 LSM5Q9Y4Y9 91 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms