RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 CX3CL1P78423 397 aa11.89□□□□□ -0.51
NEK2-201ENST00000366998 DEFB113Q30KQ7 82 aa11.89□□□□□ -0.51
NEK2-201ENST00000366998 SOHLH1Q5JUK2 328 aa11.89□□□□□ -0.51
NEK2-201ENST00000366998 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
NEK2-201ENST00000366998 WNT10AQ9GZT5 417 aa11.89□□□□□ -0.51
NEK2-201ENST00000366998 MT-CO2P00403 227 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 SLC35E3Q7Z769 313 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 CYB561D1Q8N8Q1 229 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 Q8N9W7 124 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 LINC01356Q8N9X3 169 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 RASL11BQ9BPW5 248 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 VAX2Q9UIW0 290 aa11.88□□□□□ -0.51
NEK2-201ENST00000366998 CTRB1P17538 263 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 NPBWR1P48145 328 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 PSMB3P49720 205 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 NDPQ00604 133 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 SPATA31B1PQ5VZV4 182 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 CTRB2Q6GPI1 263 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 THAP8Q8NA92 274 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 MAPK1IP1LQ8NDC0 245 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 A0A096LNT2 108 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 A0A0U1RQK1 487 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 TCRBV4S1A1TA0A5B7 111 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 CRYGCP07315 174 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
NEK2-201ENST00000366998 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
NEK2-201ENST00000366998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEK2-201ENST00000366998 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 STAG3L2P0CL84 134 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 STAG3L3P0CL85 134 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 GATA3P23771 443 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 ZNF90Q03938 601 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 Q5PR19 223 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 CLRN3Q8NCR9 226 aa11.86□□□□□ -0.51
NEK2-201ENST00000366998 IGHV7-81A0A0B4J1V7 117 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 CXorf1O96002 111 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 HLA-DRB1P01911 266 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 OR1L6Q8NGR2 347 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 ABCA1O95477 2261 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 ABCA12Q86UK0 2595 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 M0R036 132 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 PAGE4O60829 102 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 TSPAN9O75954 239 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 TAGLN2P37802 199 aaKnown RBP11.85□□□□□ -0.51
NEK2-201ENST00000366998 SELENOTP62341 195 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 MEF2BQ02080 365 aaPredicted RBP11.85□□□□□ -0.51
NEK2-201ENST00000366998 ASPHD1Q5U4P2 390 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 SPNS3Q6ZMD2 512 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 DOK5Q9P104 306 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 FUT9Q9Y231 359 aa11.85□□□□□ -0.51
NEK2-201ENST00000366998 PUS1Q9Y606 427 aaKnown RBP eCLIP11.85□□□□□ -0.51
NEK2-201ENST00000366998 I3L2K1 104 aa11.84□□□□□ -0.51
NEK2-201ENST00000366998 NUPL2O15504 423 aaKnown RBP11.84□□□□□ -0.51
NEK2-201ENST00000366998 UBE2G2P60604 165 aa11.84□□□□□ -0.51
NEK2-201ENST00000366998 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
NEK2-201ENST00000366998 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
NEK2-201ENST00000366998 KLF17Q5JT82 389 aaPredicted RBP11.84□□□□□ -0.51
NEK2-201ENST00000366998 HSPB9Q9BQS6 159 aa11.84□□□□□ -0.51
NEK2-201ENST00000366998 TMA7Q9Y2S6 64 aaKnown RBP11.84□□□□□ -0.51
NEK2-201ENST00000366998 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
NEK2-201ENST00000366998 CR1P17927 2039 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 TGFAP01135 160 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 AVPP01185 164 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 OR5G3P0C626 314 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 OR4F5Q8NH21 305 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 NANPQ8TBE9 248 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 RBM14Q96PK6 669 aaKnown RBP11.83□□□□□ -0.52
NEK2-201ENST00000366998 OR4F4Q96R69 305 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 TRGV9Q99603 122 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 SSX3Q99909 188 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 C20orf24Q9BUV8 137 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 C19orf24Q9BVV8 132 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 MEGF9Q9H1U4 602 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 SOX21Q9Y651 276 aaPredicted RBP11.83□□□□□ -0.52
NEK2-201ENST00000366998 GCHFRP30047 84 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 BPIFB3P59826 476 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 CD81P60033 236 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 AWAT1Q58HT5 328 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 TTC9CQ8N5M4 171 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 OR5T1Q8NG75 326 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 OR1L4Q8NGR5 311 aa11.83□□□□□ -0.52
NEK2-201ENST00000366998 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms