RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RNF2Q99496 336 aa11.68□□□□□ -0.54
PDGFA-201ENST00000354513 SLC25A21Q9BQT8 299 aaPredicted RBP11.68□□□□□ -0.54
PDGFA-201ENST00000354513 SMPXQ9UHP9 88 aa11.68□□□□□ -0.54
PDGFA-201ENST00000354513 GPR132Q9UNW8 380 aa11.68□□□□□ -0.54
PDGFA-201ENST00000354513 C14orf166Q9Y224 244 aaKnown RBP11.68□□□□□ -0.54
PDGFA-201ENST00000354513 HERC2O95714 4834 aa11.68□□□□□ -0.54
PDGFA-201ENST00000354513 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 OR4C46A6NHA9 309 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 C15orf62A8K5M9 175 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 CHEK1O14757 476 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 NDUFB6O95139 128 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 PIGPP57054 158 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 OR5B3Q8NH48 314 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 COPZ2Q9P299 210 aa11.67□□□□□ -0.54
PDGFA-201ENST00000354513 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 IGHV7-4-1A0A0J9YVY3 117 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 CYB5BO43169 146 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 RND3P61587 244 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 Q56UQ5 140 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 LAMTOR1Q6IAA8 161 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 TBC1D26Q86UD7 250 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 RPP25LQ8N5L8 163 aaKnown RBP11.66□□□□□ -0.54
PDGFA-201ENST00000354513 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 CCDC71LQ8N9Z2 235 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 OR1P1Q8NH06 330 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
PDGFA-201ENST00000354513 RTBDNQ9BSG5 229 aaPredicted RBP11.66□□□□□ -0.54
PDGFA-201ENST00000354513 SNAPC5O75971 98 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 TMED4Q7Z7H5 227 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 ENKURQ8TC29 256 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 RHPN1-AS1Q9BWJ2 59 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 KRTAP17-1Q9BYP8 105 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 PRNDQ9UKY0 176 aa11.65□□□□□ -0.54
PDGFA-201ENST00000354513 TCRBP04435 133 aa11.64□□□□□ -0.55
PDGFA-201ENST00000354513 AKR1C4P17516 323 aa11.64□□□□□ -0.55
PDGFA-201ENST00000354513 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
PDGFA-201ENST00000354513 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
PDGFA-201ENST00000354513 FLVCR2Q9UPI3 526 aa11.64□□□□□ -0.55
PDGFA-201ENST00000354513 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 TEX13DA0A0J9YY54 714 aaPredicted RBP11.63□□□□□ -0.55
PDGFA-201ENST00000354513 DEDDO75618 318 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 MT-CO2P00403 227 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 TFPI2P48307 235 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 PRCDQ00LT1 54 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 NRARPQ7Z6K4 114 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 CENPSQ8N2Z9 138 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 LILRB2Q8N423 598 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
PDGFA-201ENST00000354513 MISP3Q96FF7 219 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 C20orf85Q9H1P6 137 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 AGRNO00468 2067 aa11.63□□□□□ -0.55
PDGFA-201ENST00000354513 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 TRAV6A0A075B6T7 132 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 NUPL2O15504 423 aaKnown RBP11.62□□□□□ -0.55
PDGFA-201ENST00000354513 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
PDGFA-201ENST00000354513 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 NAA60Q9H7X0 242 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 NUDT15Q9NV35 164 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
PDGFA-201ENST00000354513 C3orf85A0A1B0GTC6 90 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 CRYM-AS1A6NIL9 109 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 H2AFB2P0C5Z0 115 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 P0C879 139 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 MFAP4P55083 255 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 RELQ04864 619 aaPredicted RBP11.61□□□□□ -0.55
PDGFA-201ENST00000354513 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 ST8SIA2Q92186 375 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 TP53RKQ96S44 253 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 TXN2Q99757 166 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 FAT2Q9NYQ8 4349 aa11.61□□□□□ -0.55
PDGFA-201ENST00000354513 PTTG1O95997 202 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 IGKV1-5P01602 117 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 ANXA7P20073 488 aaKnown RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 NANOS2P60321 138 aaKnown RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 SP6Q3SY56 376 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 TMEM128Q5BJH2 165 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 GBGT1Q8N5D6 347 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 C11orf68Q9H3H3 251 aaKnown RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 VSIRQ9H7M9 311 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 KCNIP3Q9Y2W7 256 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 KLK5Q9Y337 293 aaPredicted RBP11.6□□□□□ -0.55
PDGFA-201ENST00000354513 DNAH2Q9P225 4427 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 B3GALNT1O75752 331 aa11.6□□□□□ -0.55
PDGFA-201ENST00000354513 YIF1AO95070 293 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms