RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MFSD11O43934 449 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PROSCO94903 275 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ISG15P05161 165 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SERPINA7P05543 415 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 BPGMP07738 259 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OR5AC1P0C628 307 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF286BP0CG31 522 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MDKP21741 143 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CCL1P22362 96 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CDK2P24941 298 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TAS2R41P59536 307 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 GABARAPL2P60520 117 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 GLO1Q04760 184 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SLC9A3R2Q15599 337 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 HMGN3Q15651 99 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 UBE2SQ16763 222 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 C2orf83Q53S99 150 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 YIF1BQ5BJH7 314 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LCN8Q6JVE9 175 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RPL13AP3Q6NVV1 102 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SMARCD3Q6STE5 483 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ALKAL1Q6UXT8 129 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 NATD1Q8N6N6 113 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OR5K1Q8NHB7 308 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RNASE6Q93091 150 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SLC25A46Q96AG3 418 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ROPN1LQ96C74 230 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 BTF3L4Q96K17 158 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 DHRS9Q9BPW9 319 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MRPL57Q9BQC6 102 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LHX9Q9NQ69 397 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 KCNIP2Q9NS61 270 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF492Q9P255 531 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OPTCQ9UBM4 332 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PCTPQ9UKL6 214 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SNX10Q9Y5X0 201 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 BAZ2BQ9UIF8 2168 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LOC100130705A0A1B0GUX0 176 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 EEF1E1-BLOC1S5C9J1V9 151 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF878C9JN71 531 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 K7ERU9 68 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 UBFD1O14562 309 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 EEF1E1O43324 174 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SULT1C4O75897 302 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MT-CO2P00403 227 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 NRASP01111 189 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 HRASP01112 189 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 KRASP01116 189 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LINC00032P0C843 101 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 UBBP0CG47 229 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TPT1P13693 172 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 HLA-EP13747 358 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 NTF3P20783 257 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 POLR2JP52435 117 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RPL38P63173 70 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 POU6F1Q14863 301 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SPIN3Q5JUX0 258 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CALHM3Q86XJ0 350 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 BAGE3Q86Y29 109 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 BAGE2Q86Y30 109 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 C1orf174Q8IYL3 243 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OR6V1Q8N148 313 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MIR7-3HGQ8N6C7 128 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM105Q8N8V8 129 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 DTD1Q8TEA8 209 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ACY3Q96HD9 319 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OR7D2Q96RA2 312 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SHANK2-AS3Q9BTD1 123 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ATG5Q9H1Y0 275 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LYRM2Q9NU23 88 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TVP23BQ9NYZ1 205 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CALML5Q9NZT1 146 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ASB4Q9Y574 426 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 YLPM1P49750 1951 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SIP14410 1827 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LRP1BQ9NZR2 4599 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 NBASA2RRP1 2371 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 FAM236DA0A1B0GTK5 79 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM150BA6NC51 233 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 A8MUU9 505 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM238C9JI98 176 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 M0R2Z0 102 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 UPK2O00526 184 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PHYHO14832 338 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 GADD45GO95257 159 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CYB5AP00167 134 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 IL3P08700 152 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PAEPP09466 180 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RNF224P0DH78 156 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 FAM236CP0DP71 79 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF25P17030 456 aaPredicted RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MT3P25713 68 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 GABRA3P34903 492 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RPL22P35268 128 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 GABRA2P47869 451 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 SNRPFP62306 86 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MPPED2Q15777 294 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 LCE3EQ5T5B0 92 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 BCL2L15Q5TBC7 163 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 MORN3Q6PF18 240 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms