RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 NBDYA0A0U1RRE5 68 aa11.11□□□□□ -0.63
COPE-202ENST00000349893 HELTA6NFD8 242 aa11.11□□□□□ -0.63
COPE-202ENST00000349893 HERV-K104P61576 105 aa11.11□□□□□ -0.63
COPE-202ENST00000349893 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
COPE-202ENST00000349893 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
COPE-202ENST00000349893 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
COPE-202ENST00000349893 SMIM30A4D0T7 59 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 PPP5CP53041 499 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 HSPE1P61604 102 aaKnown RBP11.1□□□□□ -0.63
COPE-202ENST00000349893 ERHP84090 104 aaKnown RBP11.1□□□□□ -0.63
COPE-202ENST00000349893 DHRS2Q13268 280 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 C22orf42Q6IC83 251 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 C15orf53Q8NAA6 179 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 LGALS14Q8TCE9 139 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 GLMPQ8WWB7 406 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 SEC22AQ96IW7 307 aa11.1□□□□□ -0.63
COPE-202ENST00000349893 YTHDF1Q9BYJ9 559 aaKnown RBP11.1□□□□□ -0.63
COPE-202ENST00000349893 A0A0A6YYH2 397 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 A6NJ64 397 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 ATP6V1G2O95670 118 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 EIF2B2P49770 351 aaKnown RBP11.09□□□□□ -0.63
COPE-202ENST00000349893 EMP1P54849 157 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 SCAND1P57086 179 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 DAPK2Q9UIK4 370 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 FAT1Q14517 4588 aa11.09□□□□□ -0.63
COPE-202ENST00000349893 TRAV18A0A075B6X5 111 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 FAM90A26D6RGX4 464 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 CLN5O75503 358 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 CBX5P45973 191 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
COPE-202ENST00000349893 C16orf54Q6UWD8 224 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 NARS2Q96I59 477 aaKnown RBP11.08□□□□□ -0.64
COPE-202ENST00000349893 AUNIPQ9H7T9 357 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
COPE-202ENST00000349893 TMED3Q9Y3Q3 217 aa11.08□□□□□ -0.64
COPE-202ENST00000349893 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 IGKV1-17P01599 117 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 SNRPD3P62318 126 aaKnown RBP11.07□□□□□ -0.64
COPE-202ENST00000349893 SFXN4Q6P4A7 337 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 SPATA12Q7Z6I5 190 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 OR4A16Q8NH70 328 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 EHFQ9NZC4 300 aa11.07□□□□□ -0.64
COPE-202ENST00000349893 CORTO00230 105 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 GPR31O00270 319 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 FCER2P06734 321 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 HSPA13P48723 471 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 HOXA1P49639 335 aaPredicted RBP11.06□□□□□ -0.64
COPE-202ENST00000349893 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 ZNF2Q9BSG1 426 aaPredicted RBP11.06□□□□□ -0.64
COPE-202ENST00000349893 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
COPE-202ENST00000349893 ANAPC10Q9UM13 185 aa11.06□□□□□ -0.64
COPE-202ENST00000349893 EPM2AB3EWF7 344 aa11.05□□□□□ -0.64
COPE-202ENST00000349893 HTN3P15516 51 aa11.05□□□□□ -0.64
COPE-202ENST00000349893 NKX2-1P43699 371 aaPredicted RBP11.05□□□□□ -0.64
COPE-202ENST00000349893 RPL5P46777 297 aaKnown RBP11.05□□□□□ -0.64
COPE-202ENST00000349893 RFX2P48378 723 aa11.05□□□□□ -0.64
COPE-202ENST00000349893 ALDH3B2P48448 385 aa11.05□□□□□ -0.64
COPE-202ENST00000349893 ZNF709Q8N972 641 aa11.05□□□□□ -0.64
COPE-202ENST00000349893 NRN1Q9NPD7 142 aa11.05□□□□□ -0.64
COPE-202ENST00000349893 TXNL4BQ9NX01 149 aaKnown RBP11.05□□□□□ -0.64
COPE-202ENST00000349893 VPS13BQ7Z7G8 4022 aa11.04□□□□□ -0.64
COPE-202ENST00000349893 SRRM2Q9UQ35 2752 aaKnown RBP11.04□□□□□ -0.64
COPE-202ENST00000349893 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
COPE-202ENST00000349893 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
COPE-202ENST00000349893 SNCAP37840 140 aa11.04□□□□□ -0.64
COPE-202ENST00000349893 OR5H6Q8NGV6 325 aa11.04□□□□□ -0.64
COPE-202ENST00000349893 TMEM230Q96A57 120 aa11.04□□□□□ -0.64
COPE-202ENST00000349893 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
COPE-202ENST00000349893 YTHDF2Q9Y5A9 579 aaKnown RBP11.04□□□□□ -0.64
COPE-202ENST00000349893 TRAV30A0A087WSZ9 112 aa11.03□□□□□ -0.64
COPE-202ENST00000349893 SCGB2A1O75556 95 aa11.03□□□□□ -0.64
COPE-202ENST00000349893 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
COPE-202ENST00000349893 GDF5OSQ5U4N7 250 aa11.03□□□□□ -0.64
COPE-202ENST00000349893 Q9H521 79 aa11.03□□□□□ -0.64
COPE-202ENST00000349893 IGHV3OR16-12A0A075B7B8 117 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 P0C879 139 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 NAT1P18440 290 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
COPE-202ENST00000349893 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
COPE-202ENST00000349893 BSXQ3C1V8 233 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 TIGITQ495A1 244 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 DIABLOQ9NR28 239 aa11.02□□□□□ -0.65
COPE-202ENST00000349893 LOC102723971A0A1B0GUV8 181 aa11.01□□□□□ -0.65
COPE-202ENST00000349893 MEIS3P1A6NDR6 274 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms