RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 RASL11BQ9BPW5 248 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 SLC25A33Q9BSK2 321 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 MDFIC2A0A1B0GVS7 189 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 FSHBP01225 129 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 FBP1P09467 338 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 B2MP61769 119 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 ACOT6Q3I5F7 207 aaPredicted RBP16.73■□□□□ 0.27
VRK2-201ENST00000340157 FAM122CQ6P4D5 195 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 LFNGQ8NES3 379 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 HECTD1Q9ULT8 2610 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 IGHV3-21A0A0B4J1V1 117 aa16.72■□□□□ 0.27
VRK2-201ENST00000340157 MAP1LC3B2A6NCE7 125 aa16.72■□□□□ 0.27
VRK2-201ENST00000340157 GUK1Q16774 197 aa16.72■□□□□ 0.27
VRK2-201ENST00000340157 BCL6BQ8N143 479 aaPredicted RBP16.72■□□□□ 0.27
VRK2-201ENST00000340157 MAP1LC3BQ9GZQ8 125 aa16.72■□□□□ 0.27
VRK2-201ENST00000340157 SLC39A9Q9NUM3 307 aa16.72■□□□□ 0.27
VRK2-201ENST00000340157 BTBD17A6NE02 478 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 NPIPB5A8MRT5 1133 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 SEC14L6B5MCN3 397 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 KRBOX1C9JBD0 128 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 I3L2K1 104 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 CORTO00230 105 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 HMGB3O15347 200 aaKnown RBP16.71■□□□□ 0.27
VRK2-201ENST00000340157 MT-CO2P00403 227 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 HBE1P02100 147 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 ADCYAP1P18509 176 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 GATA2P23769 480 aaPredicted RBP16.71■□□□□ 0.27
VRK2-201ENST00000340157 RND2P52198 227 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 RAB31Q13636 194 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 THAP8Q8NA92 274 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 NARS2Q96I59 477 aaKnown RBP16.71■□□□□ 0.27
VRK2-201ENST00000340157 TREM1Q9NP99 234 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 MOB4Q9Y3A3 225 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 CTXND1A0A1B0GTU2 59 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 TMEM218A2RU14 115 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 LINC01548A6NM66 108 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 H3BUX3 64 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 SOX15O60248 233 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 RAB24Q969Q5 203 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 RARRES2Q99969 163 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 KCNIP2Q9NS61 270 aa16.71■□□□□ 0.27
VRK2-201ENST00000340157 A6NDX4 124 aa16.7■□□□□ 0.26
VRK2-201ENST00000340157 TTC9CQ8N5M4 171 aa16.7■□□□□ 0.26
VRK2-201ENST00000340157 TMEM116Q8NCL8 245 aa16.7■□□□□ 0.26
VRK2-201ENST00000340157 FANCD2OSQ96PS1 177 aa16.7■□□□□ 0.26
VRK2-201ENST00000340157 ACTR3CQ9C0K3 210 aaPredicted RBP16.7■□□□□ 0.26
VRK2-201ENST00000340157 FLNAP21333 2647 aaKnown RBP16.7■□□□□ 0.26
VRK2-201ENST00000340157 K7EIM0 57 aa16.69■□□□□ 0.26
VRK2-201ENST00000340157 ETFRF1Q6IPR1 90 aa16.69■□□□□ 0.26
VRK2-201ENST00000340157 C22orf15Q8WYQ4 148 aa16.69■□□□□ 0.26
VRK2-201ENST00000340157 MXRA5Q9NR99 2828 aa16.69■□□□□ 0.26
VRK2-201ENST00000340157 ATP6V0E1O15342 81 aa16.69■□□□□ 0.26
VRK2-201ENST00000340157 CDC34P49427 236 aaPredicted RBP16.69■□□□□ 0.26
VRK2-201ENST00000340157 LY6EQ16553 131 aa16.69■□□□□ 0.26
VRK2-201ENST00000340157 ZNF90Q03938 601 aa16.68■□□□□ 0.26
VRK2-201ENST00000340157 DEFB112Q30KQ8 113 aa16.68■□□□□ 0.26
VRK2-201ENST00000340157 CYB5R2Q6BCY4 276 aa16.68■□□□□ 0.26
VRK2-201ENST00000340157 CYP2G1PQ6ZSU1 146 aa16.68■□□□□ 0.26
VRK2-201ENST00000340157 SGMS2Q8NHU3 365 aa16.68■□□□□ 0.26
VRK2-201ENST00000340157 EIF5A2Q9GZV4 153 aaKnown RBP16.68■□□□□ 0.26
VRK2-201ENST00000340157 IGLV11-55A0A075B6I3 123 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 CYB5BO43169 146 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 BPIFB3P59826 476 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 HAGHQ16775 308 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 TMPRSS5Q9H3S3 457 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 TCRBV4S1A1TA0A5B7 111 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 RBFOX3A6NFN3 312 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 SPATA31B1PQ5VZV4 182 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 OR5T1Q8NG75 326 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 FOXC2Q99958 501 aa16.67■□□□□ 0.26
VRK2-201ENST00000340157 GSX1Q9H4S2 264 aaPredicted RBP16.67■□□□□ 0.26
VRK2-201ENST00000340157 SEPSECSQ9HD40 501 aaKnown RBP16.67■□□□□ 0.26
VRK2-201ENST00000340157 ICAM4Q14773 271 aa16.66■□□□□ 0.26
VRK2-201ENST00000340157 OR1L6Q8NGR2 347 aa16.66■□□□□ 0.26
VRK2-201ENST00000340157 PBDC1Q9BVG4 233 aa16.66■□□□□ 0.26
VRK2-201ENST00000340157 GNG13Q9P2W3 67 aa16.66■□□□□ 0.26
VRK2-201ENST00000340157 PSMB11A5LHX3 300 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 ZFP92A6NM28 416 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 SFTA3P0C7M3 94 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 PEA15Q15121 130 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 NANPQ8TBE9 248 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 TLN2Q9Y4G6 2542 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 ZNF506Q5JVG8 444 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 C10orf91Q5T1B1 145 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 TNFRSF19Q9NS68 423 aa16.65■□□□□ 0.26
VRK2-201ENST00000340157 LOC102723971A0A1B0GUV8 181 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 A0A1W2PPV4 95 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 G3V318 75 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 SMAD7O15105 426 aaKnown RBP16.64■□□□□ 0.25
VRK2-201ENST00000340157 ECSCRQ19T08 205 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 C9orf139Q6ZV77 190 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 OR4X1Q8NH49 305 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 TMEM37Q8WXS4 190 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 TRGV9Q99603 122 aa16.64■□□□□ 0.25
VRK2-201ENST00000340157 IGHV4-59P01825 116 aa16.63■□□□□ 0.25
VRK2-201ENST00000340157 PPT1P50897 306 aa16.63■□□□□ 0.25
VRK2-201ENST00000340157 DEFA5Q01523 94 aa16.63■□□□□ 0.25
VRK2-201ENST00000340157 UNQ5815/PRO19632Q6UWF5 114 aa16.63■□□□□ 0.25
VRK2-201ENST00000340157 FAM110DQ8TAY7 271 aaPredicted RBP16.63■□□□□ 0.25
VRK2-201ENST00000340157 IGLC1P0CG04 106 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms