RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 TRPT1Q86TN4 253 aaKnown RBP17.72■□□□□ 0.43
CDKN3-202ENST00000335183 TMEM230Q96A57 120 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 ZNF486Q96H40 463 aaPredicted RBP17.72■□□□□ 0.43
CDKN3-202ENST00000335183 HRH4Q9H3N8 390 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 ENY2Q9NPA8 101 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 MRPL36Q9P0J6 103 aaKnown RBP17.72■□□□□ 0.43
CDKN3-202ENST00000335183 KNCNA6PVL3 124 aa17.71■□□□□ 0.43
CDKN3-202ENST00000335183 INS-IGF2F8WCM5 200 aa17.71■□□□□ 0.43
CDKN3-202ENST00000335183 GIG44P09565 113 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-202ENST00000335183 RBMY1A1P0DJD3 496 aaKnown RBP17.71■□□□□ 0.43
CDKN3-202ENST00000335183 RBMY1CP0DJD4 496 aa17.71■□□□□ 0.43
CDKN3-202ENST00000335183 ELK1P19419 428 aa17.71■□□□□ 0.43
CDKN3-202ENST00000335183 P2RY1P47900 373 aa17.71■□□□□ 0.43
CDKN3-202ENST00000335183 RBMY1FQ15415 496 aaKnown RBP17.71■□□□□ 0.43
CDKN3-202ENST00000335183 FNDC4Q9H6D8 234 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-202ENST00000335183 HPGDSO60760 199 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 SCGB2A1O75556 95 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 ATG12O94817 140 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 P0C879 139 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 SPP1P10451 314 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 MIFP14174 115 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 C4BPBP20851 252 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 HLA-DMBP28068 263 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 NCS1P62166 190 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 MLANAQ16655 118 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 TRIM16LQ309B1 348 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 TMEM41BQ5BJD5 291 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 PVRIGQ6DKI7 326 aa17.7■□□□□ 0.42
CDKN3-202ENST00000335183 MORN3Q6PF18 240 aaPredicted RBP17.7■□□□□ 0.42
CDKN3-202ENST00000335183 NARS2Q96I59 477 aaKnown RBP17.7■□□□□ 0.42
CDKN3-202ENST00000335183 C3orf85A0A1B0GTC6 90 aa17.69■□□□□ 0.42
CDKN3-202ENST00000335183 CRYBB3P26998 211 aa17.69■□□□□ 0.42
CDKN3-202ENST00000335183 RNASE10Q5GAN6 216 aaKnown RBP17.69■□□□□ 0.42
CDKN3-202ENST00000335183 CENPSQ8N2Z9 138 aa17.69■□□□□ 0.42
CDKN3-202ENST00000335183 OR4X1Q8NH49 305 aa17.69■□□□□ 0.42
CDKN3-202ENST00000335183 RNASE11Q8TAA1 199 aaKnown RBP17.69■□□□□ 0.42
CDKN3-202ENST00000335183 GRAMD2BQ96HH9 432 aa17.69■□□□□ 0.42
CDKN3-202ENST00000335183 VPS13DQ5THJ4 4388 aa17.69■□□□□ 0.42
CDKN3-202ENST00000335183 HERC2O95714 4834 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 A0A087WXM4 84 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 FAM25AB3EWG3 89 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 FAM25CB3EWG5 89 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 FAM25GB3EWG6 89 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 SP6Q3SY56 376 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 TIGITQ495A1 244 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 ACTL10Q5JWF8 245 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 Q6ZTC4 211 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 LHFPL1Q86WI0 220 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 CLEC5AQ9NY25 188 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 COPZ2Q9P299 210 aa17.68■□□□□ 0.42
CDKN3-202ENST00000335183 VBP1P61758 197 aa17.67■□□□□ 0.42
CDKN3-202ENST00000335183 RRNAD1Q96FB5 475 aaKnown RBP17.67■□□□□ 0.42
CDKN3-202ENST00000335183 KLK11Q9UBX7 282 aa17.67■□□□□ 0.42
CDKN3-202ENST00000335183 X6R8D5 127 aa17.67■□□□□ 0.42
CDKN3-202ENST00000335183 DNAH6Q9C0G6 4158 aa17.67■□□□□ 0.42
CDKN3-202ENST00000335183 TRAV10A0A0B4J240 114 aa17.66■□□□□ 0.42
CDKN3-202ENST00000335183 A0A0G2JRQ6 117 aa17.66■□□□□ 0.42
CDKN3-202ENST00000335183 ZNF705EA8MWA4 302 aaPredicted RBP17.66■□□□□ 0.42
CDKN3-202ENST00000335183 CD3DP04234 171 aa17.66■□□□□ 0.42
CDKN3-202ENST00000335183 DCANP1Q8TF63 244 aa17.66■□□□□ 0.42
CDKN3-202ENST00000335183 HECTD4Q9Y4D8 3996 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 IGHV4-4A0A075B6R2 117 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 ELOA3CA0A087WX78 387 aaPredicted RBP17.65■□□□□ 0.42
CDKN3-202ENST00000335183 RPL5P46777 297 aaKnown RBP17.65■□□□□ 0.42
CDKN3-202ENST00000335183 DHRS2Q13268 280 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 ARRDC1Q8N5I2 433 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 CCDC71LQ8N9Z2 235 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 FUNDC2Q9BWH2 189 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 TBC1D24Q9ULP9 559 aa17.65■□□□□ 0.42
CDKN3-202ENST00000335183 TRAV30A0A087WSZ9 112 aa17.64■□□□□ 0.41
CDKN3-202ENST00000335183 TNFAIP8O95379 198 aa17.64■□□□□ 0.41
CDKN3-202ENST00000335183 IGKV1-17P01599 117 aa17.64■□□□□ 0.41
CDKN3-202ENST00000335183 EIF2B2P49770 351 aaKnown RBP17.64■□□□□ 0.41
CDKN3-202ENST00000335183 OR52I2Q8NH67 350 aa17.64■□□□□ 0.41
CDKN3-202ENST00000335183 RPS10-NUDT3A0A1W2PQS6 291 aa17.63■□□□□ 0.41
CDKN3-202ENST00000335183 UCP1P25874 307 aa17.63■□□□□ 0.41
CDKN3-202ENST00000335183 SCGB2B2Q4G0G5 96 aa17.63■□□□□ 0.41
CDKN3-202ENST00000335183 PSMG4Q5JS54 123 aa17.63■□□□□ 0.41
CDKN3-202ENST00000335183 ZFAND1Q8TCF1 268 aa17.63■□□□□ 0.41
CDKN3-202ENST00000335183 HELTA6NFD8 242 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 RORCP51449 518 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 BSXQ3C1V8 233 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 MZT2AQ6P582 158 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 Q6ZRM9 215 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 ZNF767PQ75MW2 155 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 OR4D10Q8NGI6 311 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 OR13C8Q8NGS7 320 aa17.62■□□□□ 0.41
CDKN3-202ENST00000335183 HNRNPCP07910 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDKN3-202ENST00000335183 SPCS3P61009 180 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 CSNK1G2-AS1Q8NCQ2 148 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 OR1S2Q8NGQ3 325 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 MARCH1Q8TCQ1 289 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 Q8WTZ3 238 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 RAB40CQ96S21 281 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 HEYLQ9NQ87 328 aaPredicted RBP17.61■□□□□ 0.41
CDKN3-202ENST00000335183 EXTL2Q9UBQ6 330 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 CELA1Q9UNI1 258 aa17.61■□□□□ 0.41
CDKN3-202ENST00000335183 IGLC1P0CG04 106 aa17.6■□□□□ 0.41
CDKN3-202ENST00000335183 TBPP20226 339 aa17.6■□□□□ 0.41
CDKN3-202ENST00000335183 HTR2BP41595 481 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms