RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CADP27708 2225 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 NBR2O15453 112 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 TRGV3P03979 118 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 PSMG4Q5JS54 123 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 RPP25LQ8N5L8 163 aaKnown RBP14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 ZNF414Q96IQ9 312 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 OTORQ9NRC9 128 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 NLRC5Q86WI3 1866 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 STAG3L3P0CL85 134 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 CTAG1AP78358 180 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 TEX38Q6PEX7 206 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 OCC1Q8TAD7 63 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 KIR2DL4Q99706 377 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 GGTLC1Q9BX51 225 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 VSIRQ9H7M9 311 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 MGAMO43451 1857 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 IGHV3OR16-13A0A075B7E8 117 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 IGHV3-74A0A0B4J1X5 117 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 PVRIGQ6DKI7 326 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 MDS2Q8NDY4 140 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 NOTCH3Q9UM47 2321 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 ABCA4P78363 2273 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 FAM159AQ6UWV7 190 aa14.18□□□□□ -0.14
TRAPPC11-201ENST00000334690 ZNF324O75467 553 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 SERF1AO75920 110 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 RNASE7Q9H1E1 156 aaKnown RBP14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 MYLKQ15746 1914 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 A0A0G2JLM5 398 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 PAPPA-AS1Q5QFB9 102 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 ZCCHC24Q8N2G6 241 aaKnown RBP14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 EPDR1Q9UM22 224 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 SNRPD3P62318 126 aaKnown RBP14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 HIST1H1AQ02539 215 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 GCSAMLQ5JQS6 135 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 C1QL4Q86Z23 238 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 HIST1H4GQ99525 98 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 PPP1R17O96001 155 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 GPR183P32249 361 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 GLRX5Q86SX6 157 aa14.17□□□□□ -0.14
TRAPPC11-201ENST00000334690 S4R3C0 116 aa14.16□□□□□ -0.14
TRAPPC11-201ENST00000334690 A0A1B0GV90 55 aa14.16□□□□□ -0.14
TRAPPC11-201ENST00000334690 ATXN7O15265 892 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC11-201ENST00000334690 COX6CP09669 75 aa14.16□□□□□ -0.14
TRAPPC11-201ENST00000334690 SHANK1Q9Y566 2161 aa14.16□□□□□ -0.14
TRAPPC11-201ENST00000334690 APOHP02749 345 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC11-201ENST00000334690 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.16□□□□□ -0.141e-6■■■■□ 23.8
TRAPPC11-201ENST00000334690 LINC00587B1AMM8 73 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 E9PLN8 166 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 RAB37Q96AX2 223 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 VKORC1Q9BQB6 163 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 OR11H12B2RN74 326 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 OR11H1Q8NG94 326 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 OR11H2Q8NH07 326 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 NRN1Q9NPD7 142 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 C7orf71A4D174 169 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 JOSD1Q15040 202 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 Q6P435 159 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 ORMDL3Q8N138 153 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 RNF125Q96EQ8 232 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 MIEN1Q9BRT3 115 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 ATP5LO75964 103 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 RAX2Q96IS3 184 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 NDUFAF3Q9BU61 184 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 KLK15Q9H2R5 256 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 SLC25A15Q9Y619 301 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 TTC28Q96AY4 2481 aa14.15□□□□□ -0.14
TRAPPC11-201ENST00000334690 PGPEP1LA6NFU8 196 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 LOC107984156A0A0G2JMH3 177 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 A1L4Q6 167 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 DNLZQ5SXM8 178 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 CYB5R2Q6BCY4 276 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 ARL17AQ8IVW1 177 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 FAM19A2Q8N3H0 131 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 LOC102724200A0A096LPH7 203 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 PYYP10082 97 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 TCF23Q7RTU1 214 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 PARD6GQ9BYG4 376 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGHV3-49A0A0A0MS15 119 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 COLCA1Q6ZS62 124 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 FER1L6-AS1Q8NA97 138 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 GNB1LQ9BYB4 327 aa14.14□□□□□ -0.15
TRAPPC11-201ENST00000334690 USF3Q68DE3 2245 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 H3BVH4 76 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 SELLP14151 372 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 HGFACQ04756 655 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 C14orf144Q96I85 54 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 PLP1P60201 277 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 TMEM190Q8WZ59 177 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 FOXL1Q12952 345 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 HIST1H2BLQ99880 126 aa14.13□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGHV3-23P01764 117 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 ADMP35318 185 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 IGHV3OR16-10A0A075B7F0 116 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 CXCL1P09341 107 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 CD177Q8N6Q3 437 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 C1orf147Q96MC9 270 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 FABP5P3A8MUU1 101 aa14.12□□□□□ -0.15
TRAPPC11-201ENST00000334690 LILRA1O75019 489 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms