RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CLEC19AQ6UXS0 136 aa8.21□□□□□ -1.09
COL4A6-201ENST00000334504 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.21□□□□□ -1.09
COL4A6-201ENST00000334504 C21orf62Q9NYP8 219 aa8.21□□□□□ -1.09
COL4A6-201ENST00000334504 NEUROG3Q9Y4Z2 214 aa8.21□□□□□ -1.09
COL4A6-201ENST00000334504 ZNF638Q14966 1978 aaKnown RBP8.21□□□□□ -1.1
COL4A6-201ENST00000334504 NCR2O95944 276 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 NPSP0C0P6 89 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 ITLN2Q8WWU7 325 aaPredicted RBP8.21□□□□□ -1.1
COL4A6-201ENST00000334504 GLI3P10071 1580 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 TRAV8-3A0A0A6YYJ7 113 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV1D-13A0A0B4J2D9 117 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV1-13P0DP09 117 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 IGFBP3P17936 291 aaPredicted RBP8.21□□□□□ -1.1
COL4A6-201ENST00000334504 EFNB3Q15768 340 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 GAGE2AQ6NT46 116 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 SCRT1Q9BWW7 348 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 KLF12Q9Y4X4 402 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 LINC00158P58513 81 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV1D-43A0A0B4J1Z2 117 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 PRR33A8MZF0 331 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 D6R8Y8 96 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 KLF17Q5JT82 389 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-201ENST00000334504 NHSL1Q5SYE7 1610 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 LY75O60449 1722 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 A0A1B0GW64 132 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 PRR19A6NJB7 356 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 ITGB1BP1O14713 200 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 CD33P20138 364 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 LHX2P50458 406 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 C11orf44Q8N8P7 122 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-201ENST00000334504 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-201ENST00000334504 SPAG17Q6Q759 2223 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV1D-33P01593 117 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV1-33P01594 117 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 RAMP3O60896 148 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 CCL1P22362 96 aa8.2□□□□□ -1.1
COL4A6-201ENST00000334504 MCRIP2Q9BUT9 160 aaKnown RBP8.2□□□□□ -1.1
COL4A6-201ENST00000334504 PRR32B1ATL7 298 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 MLNRO43193 412 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 UCNP55089 124 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 NSUN5P1Q3KNT7 163 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 PPP1R27Q86WC6 154 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 ASCC3Q8N3C0 2202 aaKnown RBP8.19□□□□□ -1.1
COL4A6-201ENST00000334504 SCN1AP35498 2009 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 FAM231BA6NCW3 169 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 C9JAW5 83 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 CRPP02741 224 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-201ENST00000334504 SNHG12Q9BXW3 62 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 BCORQ6W2J9 1755 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 ATP6V0BQ99437 205 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 STRCQ7RTU9 1775 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 USP54Q70EL1 1684 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 VWC2LB2RUY7 222 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 UBE2DNLQ8IWF7 75 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 DEFB104AQ8WTQ1 72 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 ARPC1AQ92747 370 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 LAMTOR3Q9UHA4 124 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 IGHV2-70P01814 119 aa8.19□□□□□ -1.1
COL4A6-201ENST00000334504 TCRBV4S1A1TA0A5B7 111 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 NPIPB13A6NJU9 1138 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 NPIPB5A8MRT5 1133 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 UPK2O00526 184 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 CTSBP07858 339 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 ATP1A1-AS1Q5TC04 95 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 CHAC1Q9BUX1 264 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 SCN8AQ9UQD0 1980 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 FAM201AQ5SY85 155 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 MORN3Q6PF18 240 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-201ENST00000334504 BMPERQ8N8U9 685 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
COL4A6-201ENST00000334504 C15orf61A6NNL5 157 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 SPATA31B1PQ5VZV4 182 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 PAPPAQ13219 1627 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 A0A087WV48 116 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 TRBV6-7A0A0A0MS04 114 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 SCN9AQ15858 1988 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 TRGV2A0A075B6R0 118 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 AHRRA9YTQ3 701 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 FOXH1O75593 365 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 IFI6P09912 130 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-201ENST00000334504 RFNGQ9Y644 331 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 TMEM86BQ8N661 226 aa8.18□□□□□ -1.1
COL4A6-201ENST00000334504 OR9G9P0C7N8 305 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 CDKN1AP38936 164 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 ID3Q02535 119 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 RPRMLQ8N4K4 120 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 LINC01560Q8TB33 94 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 CTHRC1Q96CG8 243 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 PLXNB2O15031 1838 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 SMIM10L1P0DMW3 83 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 SLC22A18ASQ8N1D0 253 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms