RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CCDC144NLQ6NUI1 221 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 TMEM105Q8N8V8 129 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 FGFBP3Q8TAT2 258 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 SLC25A33Q9BSK2 321 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 SRXN1Q9BYN0 137 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 DEFB126Q9BYW3 111 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 BOKQ9UMX3 212 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 FOXA2Q9Y261 457 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 AMMECR1Q9Y4X0 333 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 FABP6P51161 128 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 SRSF1Q07955 248 aaKnown RBP eCLIP6.86□□□□□ -1.31
SKA2-201ENST00000330137 RBPMS2Q6ZRY4 209 aaKnown RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 ZNF502Q8TBZ5 544 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 VCX2Q9H322 139 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 TRAV26-1A0A087WT03 109 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 VSTM5A8MXK1 200 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 C12orf77C9JDV5 145 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 PEX7O00628 323 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 IGHV3-7P01780 117 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 PATE4P0C8F1 98 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 FOXA3P55318 350 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 SPEM1Q8N4L4 309 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 C8orf46Q8TAG6 207 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 GTSF1Q8WW33 167 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 PERPQ96FX8 193 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 TCF19Q9Y242 345 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 TSSC4Q9Y5U2 329 aaPredicted RBP6.86□□□□□ -1.31
SKA2-201ENST00000330137 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
SKA2-201ENST00000330137 IGHV1OR21-1A0A087WYE8 117 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 C15orf61A6NNL5 157 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 SRRM4A7MD48 611 aaKnown RBP6.85□□□□□ -1.31
SKA2-201ENST00000330137 LINC00473A8K010 186 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 LMO7DNF2Z398 122 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 RPS16P62249 146 aaKnown RBP6.85□□□□□ -1.31
SKA2-201ENST00000330137 GUSBP1Q15486 140 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 LINC01559Q495D7 138 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 RPRMLQ8N4K4 120 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ZADH2Q8N4Q0 377 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 TTC9CQ8N5M4 171 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ATP6V0E2Q8NHE4 81 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ABHD17AQ96GS6 310 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ZNF714Q96N38 554 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 GCM1Q9NP62 436 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ENY2Q9NPA8 101 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 SPANXA1Q9NS26 97 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 IGKV3D-15A0A087WSY6 115 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 SERTM2A0A1B0GWG4 89 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 hADV38S2A0JD32 116 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 K7EQM0 130 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 GABRG2P18507 467 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 CAMPP49913 170 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 HSPE1P61604 102 aaKnown RBP6.85□□□□□ -1.31
SKA2-201ENST00000330137 AESQ08117 197 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 TSTD1Q8NFU3 115 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 STXBP6Q8NFX7 210 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 OR9G1Q8NH87 305 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ZNF418Q8TF45 676 aaPredicted RBP6.85□□□□□ -1.31
SKA2-201ENST00000330137 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
SKA2-201ENST00000330137 ZDBF2Q9HCK1 2354 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 CA1P00915 261 aaPredicted RBP6.84□□□□□ -1.31
SKA2-201ENST00000330137 IGFBP2P18065 325 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 ZNF808Q8N4W9 903 aaPredicted RBP6.84□□□□□ -1.31
SKA2-201ENST00000330137 GPR82Q96P67 336 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 SSBP3Q9BWW4 388 aaPredicted RBP6.84□□□□□ -1.31
SKA2-201ENST00000330137 GEMIN7Q9H840 131 aaKnown RBP6.84□□□□□ -1.31
SKA2-201ENST00000330137 TMEM14BQ9NUH8 114 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 THYN1Q9P016 225 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 NCKAP5O14513 1909 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 ADAMTS20P59510 1910 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 C19orf71A6NCJ1 209 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
SKA2-201ENST00000330137 CHEK1O14757 476 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 LAMTOR5O43504 91 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 GOSR1O95249 250 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 CYB561P49447 251 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 B3GALT5-AS1P59052 145 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 LTC4SQ16873 150 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 SPINK9Q5DT21 86 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 Q5PR19 223 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 DHRS13Q6UX07 377 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 ZNF329Q86UD4 541 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 ZNF488Q96MN9 340 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 R4GN57 208 aa6.84□□□□□ -1.31
SKA2-201ENST00000330137 SPAG17Q6Q759 2223 aa6.83□□□□□ -1.32
SKA2-201ENST00000330137 LOC102723996A0A087X1L8 192 aa6.83□□□□□ -1.32
SKA2-201ENST00000330137 C5orf49A4QMS7 147 aa6.83□□□□□ -1.32
SKA2-201ENST00000330137 VWC2LB2RUY7 222 aa6.83□□□□□ -1.32
SKA2-201ENST00000330137 MGST3O14880 152 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms