RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TGOLN2O43493 480 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 GNG7O60262 68 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 GPR183P32249 361 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 FAM106AQ4KMX7 169 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 SPANXN5Q5MJ07 72 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 ACSM6Q6P461 480 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 GPHB5Q86YW7 130 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 OR4X1Q8NH49 305 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 BMPR1BO00238 502 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 VWFP04275 2813 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 H2BFSP57053 126 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 S100A10P60903 97 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 RRAS2P62070 204 aaPredicted RBP13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 CD69Q07108 199 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 C1QL4Q86Z23 238 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 TMEM116Q8NCL8 245 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 TMEM170AQ8WVE7 144 aa13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 LSM5Q9Y4Y9 91 aaKnown RBP13.77□□□□□ -0.21
SSSCA1-201ENST00000309328 OR2T8A6NH00 312 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 DEDDO75618 318 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 RAB32Q13637 225 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 KLF5Q13887 457 aaPredicted RBP13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 SLC16A13Q7RTY0 426 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 SLC35E1Q96K37 410 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 DUX3Q96PT4 197 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 FNDC4Q9H6D8 234 aaPredicted RBP13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 PEMTQ9UBM1 199 aa13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
SSSCA1-201ENST00000309328 E5RGE8 158 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 LGALS9O00182 355 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 OVOL1O14753 267 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 CLN5O75503 358 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 SIX6O95475 246 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 TRBV12-3P01733 135 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 INSL3P51460 131 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 TMEM14EPQ6UXP3 125 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 PPP1R1CQ8WVI7 109 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 S4R3C0 116 aa13.75□□□□□ -0.21
SSSCA1-201ENST00000309328 IGHV3-21A0A0B4J1V1 117 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 PPP5D1E7EU14 171 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 FNDC10F2Z333 226 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 F8W735 103 aaPredicted RBP13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 H3BP45 60 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 NDUFA4O00483 81 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 FABP1P07148 127 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 SLURP1P55000 103 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 PAX9P55771 341 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 FGL1Q08830 312 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 REC114Q7Z4M0 266 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 STX12Q86Y82 276 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 OR10P1Q8NGE3 313 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 OR1S2Q8NGQ3 325 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 OR4C12Q96R67 309 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 GGACTQ9BVM4 153 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 LYRM2Q9NU23 88 aaPredicted RBP13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 ZMAT5Q9UDW3 170 aaKnown RBP13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 WNK1Q9H4A3 2382 aa13.74□□□□□ -0.21
SSSCA1-201ENST00000309328 TMEM50AO95807 157 aa13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 CTSGP08311 255 aa13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 GIPP09681 153 aaPredicted RBP13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 BCAP31P51572 246 aa13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 CAV2P51636 162 aa13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 ELLP55199 621 aaPredicted RBP13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 FCN2Q15485 313 aa13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 ZNF436Q9C0F3 470 aaPredicted RBP13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 SLC25A31Q9H0C2 315 aa13.73□□□□□ -0.21
SSSCA1-201ENST00000309328 OR2C1O95371 312 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 P2RY1P47900 373 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 RND2P52198 227 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 SYNJ2BPP57105 145 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 RAP2BP61225 183 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 HBG1P69891 147 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 HBG2P69892 147 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 C9orf66Q5T8R8 295 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 OR9G4Q8NGQ1 327 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 C11orf1Q9H5F2 150 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 SIGLEC8Q9NYZ4 499 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 UFC1Q9Y3C8 167 aa13.72□□□□□ -0.21
SSSCA1-201ENST00000309328 A8MWP6 167 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 PRSS46E5RG02 174 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 MPC2O95563 127 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 CXCL3P19876 107 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 OR10J1P30954 320 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 DLK1P80370 383 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 BAXQ07812 192 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 LRRC37A5PQ49AS3 106 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 C11orf87Q6NUJ2 197 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 ZNF600Q6ZNG1 722 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 OR11H7Q8NGC8 314 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 MARC2Q969Z3 335 aa13.71□□□□□ -0.21
SSSCA1-201ENST00000309328 PKD1L1Q8TDX9 2849 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 IGHV3-48P01763 117 aa13.7□□□□□ -0.22
SSSCA1-201ENST00000309328 METTL15P1P0C7V9 234 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms