RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SCN8AQ9UQD0 1980 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 CCL20P78556 96 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 RNF125Q96EQ8 232 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 ZNF414Q96IQ9 312 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
USP42-201ENST00000306177 SPTAN1Q13813 2472 aaKnown RBP13.22□□□□□ -0.29
USP42-201ENST00000306177 SLC25A15Q9Y619 301 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 ATRXP46100 2492 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 TIMM23O14925 209 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 FGF16O43320 207 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 LY6DQ14210 128 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 NPFFR1Q9GZQ6 430 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 REC114Q7Z4M0 266 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 FER1L6-AS1Q8NA97 138 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 SLC50A1Q9BRV3 221 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
USP42-201ENST00000306177 APOHP02749 345 aaPredicted RBP13.21□□□□□ -0.29
USP42-201ENST00000306177 CD24P25063 80 aa13.21□□□□□ -0.29
USP42-201ENST00000306177 KCNS1Q96KK3 526 aa13.21□□□□□ -0.29
USP42-201ENST00000306177 TUBA4BQ9H853 241 aa13.21□□□□□ -0.29
USP42-201ENST00000306177 JOSD1Q15040 202 aaPredicted RBP13.21□□□□□ -0.29
USP42-201ENST00000306177 ITLN2Q8WWU7 325 aaPredicted RBP13.21□□□□□ -0.29
USP42-201ENST00000306177 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.29
USP42-201ENST00000306177 PAX1P15863 534 aa13.21□□□□□ -0.3
USP42-201ENST00000306177 FAM166AQ6J272 317 aa13.21□□□□□ -0.3
USP42-201ENST00000306177 WFDC1Q9HC57 220 aa13.21□□□□□ -0.3
USP42-201ENST00000306177 TNFRSF18Q9Y5U5 241 aa13.21□□□□□ -0.3
USP42-201ENST00000306177 A0A1W2PRE2 83 aa13.21□□□□□ -0.3
USP42-201ENST00000306177 B3GALT5-AS1P59052 145 aa13.21□□□□□ -0.3
USP42-201ENST00000306177 ZNF256Q9Y2P7 627 aaPredicted RBP13.21□□□□□ -0.3
USP42-201ENST00000306177 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
USP42-201ENST00000306177 ZNF600Q6ZNG1 722 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 PEMTQ9UBM1 199 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 OR11H12B2RN74 326 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 PSPNO60542 156 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 MYOD1P15172 320 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 TMEM42Q69YG0 159 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 ATRAIDQ6UW56 229 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 OR11H1Q8NG94 326 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 OR11H2Q8NH07 326 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 TBL2Q9Y4P3 447 aaKnown RBP13.2□□□□□ -0.3
USP42-201ENST00000306177 TSC2P49815 1807 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 HIGD1CA8MV81 97 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 NAPSAO96009 420 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 C19orf67A6NJJ6 358 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 GNG5P63218 68 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 RHOGP84095 191 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 HEPN1Q6WQI6 88 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 DUX3Q96PT4 197 aa13.2□□□□□ -0.3
USP42-201ENST00000306177 MUC21A0A0G2JKD1 596 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 MUC21A0A140T8X8 626 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 MUC21Q5SSG8 566 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 TMEM160Q9NX00 188 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
USP42-201ENST00000306177 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
USP42-201ENST00000306177 EFNB3Q15768 340 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 ATP5LO75964 103 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 ZNF257Q9Y2Q1 563 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 MYO7BQ6PIF6 2116 aa13.19□□□□□ -0.3
USP42-201ENST00000306177 RNASE4P34096 147 aaKnown RBP13.19□□□□□ -0.3
USP42-201ENST00000306177 SRSF3P84103 164 aaKnown RBP13.19□□□□□ -0.3
USP42-201ENST00000306177 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
USP42-201ENST00000306177 SELLP14151 372 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 ORMDL3Q8N138 153 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 ASCL2Q99929 193 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 RNASE7Q9H1E1 156 aaKnown RBP13.18□□□□□ -0.3
USP42-201ENST00000306177 IGHV2-26A0A0B4J1V2 119 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 C5orf63A6NC05 138 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 FABP5P3A8MUU1 101 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 PYYP10082 97 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 LEMD1Q68G75 181 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 MBD3L4A6NDZ8 208 aaPredicted RBP13.18□□□□□ -0.3
USP42-201ENST00000306177 MBD3L3A6NE82 208 aaPredicted RBP13.18□□□□□ -0.3
USP42-201ENST00000306177 MBD3L5A6NJ08 208 aaPredicted RBP13.18□□□□□ -0.3
USP42-201ENST00000306177 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 MBD3L2Q8NHZ7 208 aaPredicted RBP13.18□□□□□ -0.3
USP42-201ENST00000306177 VDAC2P45880 294 aaPredicted RBP13.18□□□□□ -0.3
USP42-201ENST00000306177 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
USP42-201ENST00000306177 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 C1QTNF9P0C862 333 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 NLRC5Q86WI3 1866 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 SCGB1A1P11684 91 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 TMEM200BQ69YZ2 307 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 IGHG3P01860 377 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 IGHV1-8P0DP01 117 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 FOXL2NBQ6ZUU3 175 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 OSTCQ9NRP0 149 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 DIDO1Q9BTC0 2240 aaKnown RBP13.17□□□□□ -0.3
USP42-201ENST00000306177 PTPRDP23468 1912 aa13.17□□□□□ -0.3
USP42-201ENST00000306177 SUMO2P61956 95 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms