RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PRB4P10163 310 aaPredicted RBP12.46□□□□□ -0.42
SCN3B-201ENST00000299333 C21orf62Q9NYP8 219 aa12.46□□□□□ -0.42
SCN3B-201ENST00000299333 PATE3B3GLJ2 98 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 ACP7Q6ZNF0 438 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 TRBV20-1A0A075B6N2 111 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 GREM1O60565 184 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 VWC2LB2RUY7 222 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 GHRHP01286 108 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 CACNG8Q8WXS5 425 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 IGKV1D-43A0A0B4J1Z2 117 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 A0A1B0GWJ7 208 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 LHX2P50458 406 aa12.45□□□□□ -0.42
SCN3B-201ENST00000299333 TSKUQ8WUA8 353 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 CTSBP07858 339 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 RBM3P98179 157 aaKnown RBP12.44□□□□□ -0.42
SCN3B-201ENST00000299333 ORMDL2Q53FV1 153 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
SCN3B-201ENST00000299333 CD28P10747 220 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 CD33P20138 364 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 GAGE1Q13065 139 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 CD7P09564 240 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 MALP21145 153 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 TIMP3P35625 211 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 FXYD7P58549 80 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
SCN3B-201ENST00000299333 GLRXP35754 106 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 POU2AF1Q16633 256 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 A0A1W2PQF6 199 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 GAGE12HA6NDE8 117 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 CD5LO43866 347 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 PAX1P15863 534 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 LINC01587Q99440 93 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 EIF4EBP2Q13542 120 aaPredicted RBP12.43□□□□□ -0.42
SCN3B-201ENST00000299333 PMVKQ15126 192 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 TMEM42Q69YG0 159 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 CENPVQ7Z7K6 275 aaPredicted RBP12.43□□□□□ -0.42
SCN3B-201ENST00000299333 AHRRA9YTQ3 701 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 MPZP25189 248 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 FAM201AQ5SY85 155 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 SLC22A18ASQ8N1D0 253 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 CTHRC1Q96CG8 243 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 PSG8Q9UQ74 426 aa12.43□□□□□ -0.42
SCN3B-201ENST00000299333 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 PPBPP02775 128 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 IL9P15248 144 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 ASCL2Q99929 193 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 REG4Q9BYZ8 158 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 C3orf79P0CE67 100 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
SCN3B-201ENST00000299333 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 C9JAW5 83 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 EFNB3Q15768 340 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 FAM89BQ8N5H3 189 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.42□□□□□ -0.42
SCN3B-201ENST00000299333 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 ACTL10Q5JWF8 245 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.42□□□□□ -0.42
SCN3B-201ENST00000299333 SNHG12Q9BXW3 62 aa12.42□□□□□ -0.42
SCN3B-201ENST00000299333 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 RAMP3O60896 148 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 HS3ST3B1Q9Y662 390 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 TMEM8BA6NDV4 472 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 NPIPB13A6NJU9 1138 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 NPIPB5A8MRT5 1133 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 GFRA3O60609 400 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 FCN3O75636 299 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 FAM231BA6NCW3 169 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 CKAP5Q14008 2032 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 IGFBP3P17936 291 aaPredicted RBP12.41□□□□□ -0.42
SCN3B-201ENST00000299333 MESP2Q0VG99 397 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 SLAQ13239 276 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
SCN3B-201ENST00000299333 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 TRGV2A0A075B6R0 118 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 A0A087WV48 116 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 SPAARA0A1B0GVQ0 90 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 A8MWP6 167 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 ZNF703Q9H7S9 590 aaPredicted RBP12.4□□□□□ -0.42
SCN3B-201ENST00000299333 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 SNRNP200O75643 2136 aaKnown RBP12.4□□□□□ -0.42
SCN3B-201ENST00000299333 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 PPP1R27Q86WC6 154 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 SCRT1Q9BWW7 348 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.4□□□□□ -0.42
SCN3B-201ENST00000299333 LAGE3Q14657 143 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 CDCP2Q5VXM1 449 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
SCN3B-201ENST00000299333 D6R8Y8 96 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms