RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 IGKV2D-40P01614 121 aaPredicted RBP14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 SLC25A2Q9BXI2 301 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 IGHV1-2P23083 117 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 LTBRP36941 435 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 SPATA31B1PQ5VZV4 182 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 LOXL4Q96JB6 756 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 hDV102S1A0JD36 115 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 ZNF415Q09FC8 603 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 C18orf12Q96KH6 178 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 PLXNB2O15031 1838 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 NDUFA2O43678 99 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 TNFRSF6BO95407 300 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 EPDR1Q9UM22 224 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 ESPL1Q14674 2120 aa14.05□□□□□ -0.16
TSPAN3-201ENST00000267970 CHCHD2Q9Y6H1 151 aaPredicted RBP14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 OR9G9P0C7N8 305 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 IGFL4Q6B9Z1 124 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 ST20Q9HBF5 79 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 LYZL4Q96KX0 146 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 NPIPB13A6NJU9 1138 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 NPIPB5A8MRT5 1133 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 EFEMP2O95967 443 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 GREM1O60565 184 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 CD28P10747 220 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 TMEM170AQ8WVE7 144 aa14.04□□□□□ -0.16
TSPAN3-201ENST00000267970 SEC16AO15027 2179 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 IGKV1D-8A0A087WSZ0 117 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 COLCA1Q6ZS62 124 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 SFXN3Q9BWM7 321 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 H0YIZ8 118 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 KBTBD11-OT1A0A1B0GTJ5 212 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 APOBEC3AP31941 199 aaPredicted RBP14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 A0A087X0K7 114 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 IGHV2OR16-5A0A0B4J2B6 119 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 H7C1H1 209 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 NSUN5P1Q3KNT7 163 aa14.03□□□□□ -0.16
TSPAN3-201ENST00000267970 A0A0A6YYD4 124 aa14.02□□□□□ -0.16
TSPAN3-201ENST00000267970 Q6ZT83 130 aa14.02□□□□□ -0.16
TSPAN3-201ENST00000267970 C7orf69Q9H7B7 122 aa14.02□□□□□ -0.16
TSPAN3-201ENST00000267970 DPM3Q9P2X0 92 aa14.02□□□□□ -0.16
TSPAN3-201ENST00000267970 PPP1R32Q7Z5V6 425 aa14.02□□□□□ -0.16
TSPAN3-201ENST00000267970 LAMB2P55268 1798 aa14.02□□□□□ -0.16
TSPAN3-201ENST00000267970 GGTLC3B5MD39 225 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 HGFACQ04756 655 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 RNF182Q8N6D2 247 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 RALGAPA1Q6GYQ0 2036 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 DPM2O94777 84 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 STHQ8IWL8 128 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 TM2D1Q9BX74 207 aa14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 SEPSECSQ9HD40 501 aaKnown RBP14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 RPL15P61313 204 aaKnown RBP14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 ZNF474Q6S9Z5 364 aaPredicted RBP14.02□□□□□ -0.17
TSPAN3-201ENST00000267970 LINC00158P58513 81 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 NUTF2P61970 127 aaKnown RBP14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 LCN12Q6JVE5 192 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 TRAV9-2A0A087WT02 112 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 UCP1P25874 307 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 TP53BP1Q12888 1972 aaPredicted RBP14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 IGKCP01834 107 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 PSG1P11464 419 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 EXOC3-AS1Q8N2X6 119 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 ZNF703Q9H7S9 590 aaPredicted RBP14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 LY6G6FQ5SQ64 297 aa14.01□□□□□ -0.17
TSPAN3-201ENST00000267970 IFI27P40305 119 aaPredicted RBP14□□□□□ -0.17
TSPAN3-201ENST00000267970 ZNF138P52744 262 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 DLEC1Q9Y238 1755 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 COL4A1P02462 1669 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 B9A039 149 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 HIST1H2BLQ99880 126 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 CABIN1Q9Y6J0 2220 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 M0R2P5 195 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 MYOD1P15172 320 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 C10orf55Q5SWW7 151 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 RIPPLY2Q5TAB7 128 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 SP9P0CG40 484 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 TIMP3P35625 211 aa14□□□□□ -0.17
TSPAN3-201ENST00000267970 IMMP1LQ96LU5 166 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 FOXD3Q9UJU5 478 aaPredicted RBP13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 CYSLTR1Q9Y271 337 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 FGFBP3Q8TAT2 258 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 A0A087WWC5 75 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 OSR1Q8TAX0 266 aaPredicted RBP13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 LINC00205P59089 165 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 TMEM219Q86XT9 240 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 C9orf106Q8NAJ2 232 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 ANKRD36A6QL64 1941 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 MPDZO75970 2070 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 RTTNQ86VV8 2226 aa13.99□□□□□ -0.17
TSPAN3-201ENST00000267970 CST9LQ9H4G1 147 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 OTORQ9NRC9 128 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 RAB9AP51151 201 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 CIARTQ8N365 385 aaPredicted RBP13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 ZNF319Q9P2F9 582 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 PSG8Q9UQ74 426 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 TCRAP04437 139 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 COX5BP10606 129 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 NDPQ00604 133 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 ERG28Q9UKR5 140 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms