RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 CLINT1Q14677 625 aa16.12■□□□□ 0.17
RTCA-201ENST00000260563 OPCMLQ14982 345 aa16.12■□□□□ 0.17
RTCA-201ENST00000260563 HIST2H2BDQ6DRA6 164 aa16.12■□□□□ 0.17
RTCA-201ENST00000260563 SLC25A24Q6NUK1 477 aa16.12■□□□□ 0.17
RTCA-201ENST00000260563 LILRB2Q8N423 598 aa16.12■□□□□ 0.17
RTCA-201ENST00000260563 CITED2Q99967 270 aaPredicted RBP16.12■□□□□ 0.17
RTCA-201ENST00000260563 CYB5BO43169 146 aa16.11■□□□□ 0.17
RTCA-201ENST00000260563 PRH1P02810 166 aa16.11■□□□□ 0.17
RTCA-201ENST00000260563 RAB9AP51151 201 aa16.11■□□□□ 0.17
RTCA-201ENST00000260563 TPPP2P59282 170 aa16.11■□□□□ 0.17
RTCA-201ENST00000260563 MISP3Q96FF7 219 aa16.11■□□□□ 0.17
RTCA-201ENST00000260563 MS4A10Q96PG2 267 aa16.11■□□□□ 0.17
RTCA-201ENST00000260563 TSSC4Q9Y5U2 329 aaPredicted RBP16.11■□□□□ 0.17
RTCA-201ENST00000260563 TRGV3P03979 118 aa16.1■□□□□ 0.17
RTCA-201ENST00000260563 ATP6V1FQ16864 119 aa16.1■□□□□ 0.17
RTCA-201ENST00000260563 ATP5SQ99766 215 aa16.1■□□□□ 0.17
RTCA-201ENST00000260563 GGACTQ9BVM4 153 aa16.1■□□□□ 0.17
RTCA-201ENST00000260563 KLK15Q9H2R5 256 aa16.1■□□□□ 0.17
RTCA-201ENST00000260563 WFDC1Q9HC57 220 aa16.1■□□□□ 0.17
RTCA-201ENST00000260563 IGLV11-55A0A075B6I3 123 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 DFFBO76075 338 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 BRI3O95415 125 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 OPRK1P41145 380 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 CD69Q07108 199 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 EXOSC2Q13868 293 aaKnown RBP16.09■□□□□ 0.17
RTCA-201ENST00000260563 SPATA3Q8NHX4 192 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 FANCD2OSQ96PS1 177 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 CYTL1Q9NRR1 136 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 HIST1H1BP16401 226 aaKnown RBP16.09■□□□□ 0.17
RTCA-201ENST00000260563 GPX4P36969 197 aaPredicted RBP16.09■□□□□ 0.17
RTCA-201ENST00000260563 DLK1P80370 383 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 NDUFA11Q86Y39 141 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 MYOZ3Q8TDC0 251 aa16.09■□□□□ 0.17
RTCA-201ENST00000260563 ZNF266Q14584 549 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 VWC2Q2TAL6 325 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 KLK9Q2XQG4 91 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 ETFRF1Q6IPR1 90 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 TMEM147Q9BVK8 224 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 ZNF471Q9BX82 626 aaPredicted RBP16.08■□□□□ 0.16
RTCA-201ENST00000260563 FNDC4Q9H6D8 234 aaPredicted RBP16.08■□□□□ 0.16
RTCA-201ENST00000260563 UQCC1Q9NVA1 299 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 THYN1Q9P016 225 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 KLK9Q9UKQ9 250 aa16.08■□□□□ 0.16
RTCA-201ENST00000260563 RPS10-NUDT3A0A1W2PQS6 291 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 A0A1W2PRX2 142 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 MT-CO2P00403 227 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 DEFA5Q01523 94 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 MLANAQ16655 118 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 NSUN5P1Q3KNT7 163 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 RPL7L1Q6DKI1 246 aaKnown RBP16.07■□□□□ 0.16
RTCA-201ENST00000260563 SLC16A13Q7RTY0 426 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 ZNF491Q8N8L2 437 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 CACNG8Q8WXS5 425 aa16.07■□□□□ 0.16
RTCA-201ENST00000260563 BORCS7-ASMTA0A0B4J1R7 106 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 TRBV9A0A0B4J1U6 114 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 FAM223BA6NKX1 122 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 FNDC10F2Z333 226 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 I3L2K1 104 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 OR2J3O76001 311 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 JTBO76095 146 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 RHOGP84095 191 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 SLC51BQ86UW2 128 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 FAM223AQ8IWN6 122 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 KLHL30-AS1Q8NEE0 82 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 UBE2E2Q96LR5 201 aa16.06■□□□□ 0.16
RTCA-201ENST00000260563 A0A0G2JLM5 398 aa16.05■□□□□ 0.16
RTCA-201ENST00000260563 UBE2L5PA0A1B0GUS4 154 aa16.05■□□□□ 0.16
RTCA-201ENST00000260563 SMCO3A2RU48 225 aa16.05■□□□□ 0.16
RTCA-201ENST00000260563 NUDT19A8MXV4 375 aa16.05■□□□□ 0.16
RTCA-201ENST00000260563 NECAP1Q8NC96 275 aa16.05■□□□□ 0.16
RTCA-201ENST00000260563 SLC35E1Q96K37 410 aa16.05■□□□□ 0.16
RTCA-201ENST00000260563 IGHV3-21A0A0B4J1V1 117 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 K7EIM0 57 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 IFNA5P01569 189 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 CDX1P47902 265 aaPredicted RBP16.04■□□□□ 0.16
RTCA-201ENST00000260563 KIAA0141Q14154 515 aaPredicted RBP16.04■□□□□ 0.16
RTCA-201ENST00000260563 GAMTQ14353 236 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 UBAC2Q8NBM4 344 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 USMG5Q96IX5 58 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 NPVFQ9HCQ7 196 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 FBXL7Q9UJT9 491 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 ADARB2-AS1A8MUL3 147 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 NDUFB8O95169 186 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 IGHV3-48P01763 117 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 AKR1C1Q04828 323 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 C18orf65Q6ZTR6 163 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 STOML3Q8TAV4 291 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 C4orf3Q8WVX3 66 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 GNB4Q9HAV0 340 aa16.04■□□□□ 0.16
RTCA-201ENST00000260563 IGHV3-11P01762 117 aa16.03■□□□□ 0.16
RTCA-201ENST00000260563 EIF5AP63241 154 aaKnown RBP16.03■□□□□ 0.16
RTCA-201ENST00000260563 C15orf32Q32M92 178 aa16.03■□□□□ 0.16
RTCA-201ENST00000260563 TREML4Q6UXN2 200 aa16.03■□□□□ 0.16
RTCA-201ENST00000260563 SCGB1C1Q8TD33 95 aa16.03■□□□□ 0.16
RTCA-201ENST00000260563 SCARB1Q8WTV0 552 aa16.03■□□□□ 0.16
RTCA-201ENST00000260563 PARD6GQ9BYG4 376 aaPredicted RBP16.03■□□□□ 0.16
RTCA-201ENST00000260563 WDR61Q9GZS3 305 aaKnown RBP16.03■□□□□ 0.16
RTCA-201ENST00000260563 TPT1P13693 172 aaKnown RBP16.02■□□□□ 0.15
RTCA-201ENST00000260563 ATP5G2Q06055 141 aa16.02■□□□□ 0.15
RTCA-201ENST00000260563 C8orf86Q6ZUL3 223 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms