RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 CX3CL1P78423 397 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 DIAPH2-AS1Q14236 149 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 ETFRF1Q6IPR1 90 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 OR4B1Q8NGF8 309 aa13.78□□□□□ -0.2
SGPP1-201ENST00000247225 C21orf140B9A014 251 aa13.77□□□□□ -0.2
SGPP1-201ENST00000247225 E7EUB6 86 aa13.77□□□□□ -0.2
SGPP1-201ENST00000247225 SAA1P0DJI8 122 aaPredicted RBP13.77□□□□□ -0.2
SGPP1-201ENST00000247225 BHLHA15Q7RTS1 189 aaPredicted RBP13.77□□□□□ -0.2
SGPP1-201ENST00000247225 UBALD2Q8IYN6 164 aa13.77□□□□□ -0.2
SGPP1-201ENST00000247225 ZNF503Q96F45 646 aa13.77□□□□□ -0.2
SGPP1-201ENST00000247225 C20orf144Q9BQM9 153 aa13.77□□□□□ -0.2
SGPP1-201ENST00000247225 CBY3A6NI87 242 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 YPEL1O60688 119 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 AMY1AP04745 511 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 COMPP49747 757 aaPredicted RBP13.77□□□□□ -0.21
SGPP1-201ENST00000247225 SELENOTP62341 195 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 FLYWCH2Q96CP2 140 aaKnown RBP13.77□□□□□ -0.21
SGPP1-201ENST00000247225 PGLYRP4Q96LB8 373 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 YPEL2Q96QA6 119 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 UQCR10Q9UDW1 63 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 C8orf88P0DMB2 117 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 KLF3P57682 345 aaPredicted RBP13.77□□□□□ -0.21
SGPP1-201ENST00000247225 ZC2HC1AQ96GY0 325 aa13.77□□□□□ -0.21
SGPP1-201ENST00000247225 TEX50A0A1B0GTY4 177 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 HIGD1CA8MV81 97 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 TNFAIP6P98066 277 aaPredicted RBP13.76□□□□□ -0.21
SGPP1-201ENST00000247225 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 WDR73Q6P4I2 378 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 FAM90A1Q86YD7 464 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 TCTEX1D1Q8N7M0 179 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 PAXXQ9BUH6 204 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 GNB1LQ9BYB4 327 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 A0A1B0GWJ7 208 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 SRRM5B3KS81 715 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
SGPP1-201ENST00000247225 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
SGPP1-201ENST00000247225 PRSS46E5RG02 174 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 WT1P19544 449 aaPredicted RBP13.75□□□□□ -0.21
SGPP1-201ENST00000247225 CCL17Q92583 94 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 MUC21A0A0G2JKD1 596 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 MUC21A0A140T8X8 626 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 PGPA6NDG6 321 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 IGKV3-15P01624 115 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 AREGP15514 252 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 C17orf58Q2M2W7 97 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 TRIP6Q15654 476 aaKnown RBP13.75□□□□□ -0.21
SGPP1-201ENST00000247225 OR10X1Q8NGY0 326 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 COL6A6A6NMZ7 2263 aa13.75□□□□□ -0.21
SGPP1-201ENST00000247225 KBTBD11-OT1A0A1B0GTJ5 212 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 IGLC2P0DOY2 106 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 IGLC3P0DOY3 106 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 ERHP84090 104 aaKnown RBP13.74□□□□□ -0.21
SGPP1-201ENST00000247225 FAM27E3Q08E93 113 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 LINC00173Q6ZV60 143 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 TXNDC17Q9BRA2 123 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 SFXN3Q9BWM7 321 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 SAP30LQ9HAJ7 183 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 TRAV8-1A0A0A6YYK1 113 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 hDV102S1A0JD36 115 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 S100A7P31151 101 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 PRR20EP86478 221 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 PRR20CP86479 221 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 PRR20DP86480 221 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 PRR20BP86481 221 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 PRR20AP86496 221 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 C10orf113Q5VZT2 155 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 SSX8Q7RTT4 187 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 NIT1Q86X76 327 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 CORO2AQ92828 525 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 COLQQ9Y215 455 aaPredicted RBP13.74□□□□□ -0.21
SGPP1-201ENST00000247225 CT45A6P0DMU7 189 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 CT45A5P0DMU8 189 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 CT45A7P0DMV0 189 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 NUP35Q8NFH5 326 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 PRR7Q8TB68 274 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 CBY1Q9Y3M2 126 aa13.74□□□□□ -0.21
SGPP1-201ENST00000247225 SLC25A17O43808 307 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 SELENOVP59797 346 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 C18orf32Q8TCD1 76 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 SLC25A33Q9BSK2 321 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 PRNDQ9UKY0 176 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 WASHC3Q9Y3C0 194 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 SPAARA0A1B0GVQ0 90 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 HLA-DQA1P01909 254 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 Q0VG73 95 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 ZNF841Q6ZN19 808 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 SPRY4Q9C004 299 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 S4R3C0 116 aa13.73□□□□□ -0.21
SGPP1-201ENST00000247225 ANKRD11Q6UB99 2663 aaPredicted RBP13.73□□□□□ -0.21
SGPP1-201ENST00000247225 PRRX1P54821 245 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 GDF5OSQ5U4N7 250 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 IGFBPL1Q8WX77 278 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 TMEM14BQ9NUH8 114 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 C9JCJ5 164 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 EBLN2Q6P2I7 272 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 LINC00305Q7Z4B0 112 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 WFDC8Q8IUA0 241 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms