RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 LINC00322Q6ZN03 302 aaPredicted RBP12.57□□□□□ -0.4
CLTA-201ENST00000242285 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
CLTA-201ENST00000242285 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
CLTA-201ENST00000242285 TUBA4BQ9H853 241 aa12.57□□□□□ -0.4
CLTA-201ENST00000242285 SACSQ9NZJ4 4579 aa12.57□□□□□ -0.4
CLTA-201ENST00000242285 TSPAN4O14817 238 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 CD7P09564 240 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 SLC25A6P12236 298 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 SMCO1Q147U7 214 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 LAMTOR1Q6IAA8 161 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 RBPMS2Q6ZRY4 209 aaKnown RBP12.56□□□□□ -0.4
CLTA-201ENST00000242285 NOXA1Q86UR1 476 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 OR4X1Q8NH49 305 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
CLTA-201ENST00000242285 HSPB7Q9UBY9 170 aa12.56□□□□□ -0.4
CLTA-201ENST00000242285 RYR2Q92736 4967 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 A0A1B0GU03 582 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 RPS10-NUDT3A0A1W2PQS6 291 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 SCGB2A1O75556 95 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 TMEM50AO95807 157 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
CLTA-201ENST00000242285 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 TRIQKQ629K1 86 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 SLC24A4Q8NFF2 622 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 RNASEH2CQ8TDP1 164 aaKnown RBP12.55□□□□□ -0.4
CLTA-201ENST00000242285 CITED4Q96RK1 184 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 C7orf50Q9BRJ6 194 aaKnown RBP12.55□□□□□ -0.4
CLTA-201ENST00000242285 GINS3Q9BRX5 216 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 C20orf24Q9BUV8 137 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
CLTA-201ENST00000242285 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
CLTA-201ENST00000242285 IGHV7-4-1A0A0J9YVY3 117 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 CLN5O75503 358 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 CD5P06127 495 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 OPRK1P41145 380 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 INPP1P49441 399 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 BAK1Q16611 211 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 HAGHQ16775 308 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 ZNF600Q6ZNG1 722 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 LYZL2Q7Z4W2 148 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 CENPSQ8N2Z9 138 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 SDHCQ99643 169 aaPredicted RBP12.54□□□□□ -0.4
CLTA-201ENST00000242285 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 U3KQ87 197 aa12.54□□□□□ -0.4
CLTA-201ENST00000242285 TRAV30A0A087WSZ9 112 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 SCAF4O95104 1147 aaKnown RBP12.53□□□□□ -0.4
CLTA-201ENST00000242285 IGHV3-48P01763 117 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 SLC25A4P12235 298 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 LYL1P12980 280 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 BMI1P35226 326 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 LINC00299Q6ZSB3 139 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 PRR13Q9NZ81 148 aa12.53□□□□□ -0.4
CLTA-201ENST00000242285 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 FAM90A26D6RGX4 464 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 CHEK1O14757 476 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 PITX3O75364 302 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 YIF1AO95070 293 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 NDUFB6O95139 128 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 SFT2D2O95562 160 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 NPY1RP25929 384 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 ETFRF1Q6IPR1 90 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 TOMM20LQ6UXN7 152 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 DEFB125Q8N687 156 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 ZFAND3Q9H8U3 227 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 TMED3Q9Y3Q3 217 aa12.52□□□□□ -0.41
CLTA-201ENST00000242285 CENPXA8MT69 81 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 VAMP1P23763 118 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 PPP1R1AQ13522 171 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 DTD1Q8TEA8 209 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 TMEM170AQ8WVE7 144 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 VSIRQ9H7M9 311 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 LYSTQ99698 3801 aa12.51□□□□□ -0.41
CLTA-201ENST00000242285 DNAH1Q9P2D7 4330 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 IGHV3OR16-8A0A075B7F1 116 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
CLTA-201ENST00000242285 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
CLTA-201ENST00000242285 OR4C46A6NHA9 309 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 ZNF207O43670 478 aaKnown RBP12.5□□□□□ -0.41
CLTA-201ENST00000242285 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
CLTA-201ENST00000242285 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 OR1S2Q8NGQ3 325 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 OR1S1Q8NH92 325 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
CLTA-201ENST00000242285 MRPL36Q9P0J6 103 aaKnown RBP12.5□□□□□ -0.41
CLTA-201ENST00000242285 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLTA-201ENST00000242285 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
CLTA-201ENST00000242285 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
CLTA-201ENST00000242285 IL7P13232 177 aa12.49□□□□□ -0.41
CLTA-201ENST00000242285 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
CLTA-201ENST00000242285 MLANAQ16655 118 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms