RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 PITPNC1Q9UKF7 332 aa10.48□□□□□ -0.73
SLIRP-201ENST00000238688 TMEM218A2RU14 115 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 SCGB2A1O75556 95 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 MT-CO2P00403 227 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 FABP1P07148 127 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 KLK9Q2XQG4 91 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 C10orf91Q5T1B1 145 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 RBMS3Q6XE24 437 aaKnown RBP10.47□□□□□ -0.73
SLIRP-201ENST00000238688 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 OR10W1Q8NGF6 305 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 OR10G9Q8NGN4 311 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 OR10G7Q8NGN6 311 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 SFT2D1Q8WV19 159 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 TMEM190Q8WZ59 177 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 ARPC1AQ92747 370 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 ZNF48Q96MX3 618 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-201ENST00000238688 SLC39A9Q9NUM3 307 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 THYN1Q9P016 225 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 KLK9Q9UKQ9 250 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 ARL2-SNX15V9GYD0 113 aa10.47□□□□□ -0.73
SLIRP-201ENST00000238688 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 AGPAT2O15120 278 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 OPN1MWP04001 364 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.73
SLIRP-201ENST00000238688 OPN1MW2P0DN77 364 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 OPN1MW3P0DN78 364 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 HIST1H1BP16401 226 aaKnown RBP10.46□□□□□ -0.73
SLIRP-201ENST00000238688 CTRB1P17538 263 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 CNTFRP26992 372 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PSMB3P49720 205 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 B2MP61769 119 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 RHOBP62745 196 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PRR20EP86478 221 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PRR20CP86479 221 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PRR20DP86480 221 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PRR20BP86481 221 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PRR20AP86496 221 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 GAMTQ14353 236 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 FXYD3Q14802 87 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 GUK1Q16774 197 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 CTRB2Q6GPI1 263 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 SPSB3Q6PJ21 355 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 MGST2Q99735 147 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 RASL11BQ9BPW5 248 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 MANBALQ9NQG1 85 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 CARHSP1Q9Y2V2 147 aaKnown RBP10.46□□□□□ -0.73
SLIRP-201ENST00000238688 MOB4Q9Y3A3 225 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 FAM96BQ9Y3D0 163 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 PXMP4Q9Y6I8 212 aa10.46□□□□□ -0.73
SLIRP-201ENST00000238688 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 A0A1W2PRD5 423 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 A0A1W2PRF3 423 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 A0A1W2PRM7 423 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 E7EUB6 86 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 MYOD1P15172 320 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 CDC34P49427 236 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-201ENST00000238688 FHITP49789 147 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 HILS1P60008 231 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 SSBP2P81877 361 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-201ENST00000238688 ZNF506Q5JVG8 444 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 C10orf55Q5SWW7 151 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 ACSM6Q6P461 480 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 S100A7AQ86SG5 101 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 SVBPQ8N300 66 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 RPP25LQ8N5L8 163 aaKnown RBP10.45□□□□□ -0.74
SLIRP-201ENST00000238688 TTC9CQ8N5M4 171 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 GATAD1Q8WUU5 269 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 RBM14Q96PK6 669 aaKnown RBP10.45□□□□□ -0.74
SLIRP-201ENST00000238688 ATP6V0BQ99437 205 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 PFDN5Q99471 154 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 TRGV9Q99603 122 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 SLC45A2Q9UMX9 530 aa10.45□□□□□ -0.74
SLIRP-201ENST00000238688 TRAV30A0A087WSZ9 112 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
SLIRP-201ENST00000238688 CRIP2P52943 208 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-201ENST00000238688 ELLP55199 621 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-201ENST00000238688 GNB1P62873 340 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 CX3CL1P78423 397 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 PRB3Q04118 309 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-201ENST00000238688 HNF4GQ14541 408 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 STPG3Q8N7X2 389 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 Q8N9W7 124 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 BPIFCQ8NFQ6 507 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 ABHD5Q8WTS1 349 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 SSMEM1Q8WWF3 244 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 NARS2Q96I59 477 aaKnown RBP10.44□□□□□ -0.74
SLIRP-201ENST00000238688 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
SLIRP-201ENST00000238688 SLC35B3Q9H1N7 401 aa10.44□□□□□ -0.74
SLIRP-201ENST00000238688 TREM1Q9NP99 234 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 199.1 ms