RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 ELLP55199 621 aaPredicted RBP12.16□□□□□ -0.46
COLCA2-207ENST00000639470 STEAP1BQ6NZ63 245 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 SPSB3Q6PJ21 355 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 ARRDC1Q8N5I2 433 aa12.16□□□□□ -0.46
COLCA2-207ENST00000639470 LOC102724200A0A096LPH7 203 aaPredicted RBP12.15□□□□□ -0.46
COLCA2-207ENST00000639470 TRAV25A0A0B4J276 109 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 IGHV3-66A0A0C4DH42 116 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 RPL35AP18077 110 aaKnown RBP12.15□□□□□ -0.46
COLCA2-207ENST00000639470 TRIM16LQ309B1 348 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 APRG1Q8IVJ8 170 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 LILRB2Q8N423 598 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 TERB2Q8NHR7 220 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 DYNC2LI1Q8TCX1 351 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 RTBDNQ9BSG5 229 aaPredicted RBP12.15□□□□□ -0.46
COLCA2-207ENST00000639470 SMPXQ9UHP9 88 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 RYR2Q92736 4967 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 CSMD3Q7Z407 3707 aa12.15□□□□□ -0.46
COLCA2-207ENST00000639470 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 CHEK1O14757 476 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 TSPAN4O14817 238 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 NXPH3O95157 252 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 RNASE2P10153 161 aaKnown RBP12.14□□□□□ -0.47
COLCA2-207ENST00000639470 MFAP4P55083 255 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 TAS2R19P59542 299 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 GBGT1Q8N5D6 347 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 SPAG8Q99932 426 aaPredicted RBP12.14□□□□□ -0.47
COLCA2-207ENST00000639470 RHPN1-AS1Q9BWJ2 59 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 NXF2Q9GZY0 626 aaKnown RBP12.14□□□□□ -0.47
COLCA2-207ENST00000639470 FNDC4Q9H6D8 234 aaPredicted RBP12.14□□□□□ -0.47
COLCA2-207ENST00000639470 COPZ2Q9P299 210 aa12.14□□□□□ -0.47
COLCA2-207ENST00000639470 IGHV7-4-1A0A0J9YVY3 117 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 NUPL2O15504 423 aaKnown RBP12.13□□□□□ -0.47
COLCA2-207ENST00000639470 IFNA17P01571 189 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 UCP1P25874 307 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 MEF2DQ14814 521 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 SLC35G3Q8N808 338 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 SMIM4Q8WVI0 70 aa12.13□□□□□ -0.47
COLCA2-207ENST00000639470 ZNF486Q96H40 463 aaPredicted RBP12.13□□□□□ -0.47
COLCA2-207ENST00000639470 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 A0A1B0GU03 582 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 C15orf62A8K5M9 175 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 K7EMT4 169 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 GNG7O60262 68 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 TBPP20226 339 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 HOXA1P49639 335 aaPredicted RBP12.12□□□□□ -0.47
COLCA2-207ENST00000639470 ERHP84090 104 aaKnown RBP12.12□□□□□ -0.47
COLCA2-207ENST00000639470 ANKRD55Q3KP44 614 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 TOMM20LQ6UXN7 152 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 TMEM116Q8NCL8 245 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 ST8SIA2Q92186 375 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 DIRAS2Q96HU8 199 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
COLCA2-207ENST00000639470 FCGR2BP31994 310 aaPredicted RBP12.11□□□□□ -0.47
COLCA2-207ENST00000639470 IL18Q14116 193 aa12.11□□□□□ -0.47
COLCA2-207ENST00000639470 WFDC3Q8IUB2 231 aa12.11□□□□□ -0.47
COLCA2-207ENST00000639470 FAM24BQ8N5W8 94 aa12.11□□□□□ -0.47
COLCA2-207ENST00000639470 OR51S1Q8NGJ8 323 aa12.11□□□□□ -0.47
COLCA2-207ENST00000639470 ZFAND1Q8TCF1 268 aa12.11□□□□□ -0.47
COLCA2-207ENST00000639470 ZFAND3Q9H8U3 227 aa12.11□□□□□ -0.47
COLCA2-207ENST00000639470 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 RELQ04864 619 aaPredicted RBP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 SELENOHQ8IZQ5 122 aaKnown RBP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 RNASE11Q8TAA1 199 aaKnown RBP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 TMEM230Q96A57 120 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 GPR146Q96CH1 333 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 ATP6V0BQ99437 205 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 SLIRPQ9GZT3 109 aaKnown RBP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 TMEM222Q9H0R3 208 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 NAA60Q9H7X0 242 aa12.1□□□□□ -0.47
COLCA2-207ENST00000639470 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 PUS1Q9Y606 427 aaKnown RBP eCLIP12.1□□□□□ -0.47
COLCA2-207ENST00000639470 TEX13DA0A0J9YY54 714 aaPredicted RBP12.09□□□□□ -0.47
COLCA2-207ENST00000639470 H3BMQ9 156 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 TMEM50AO95807 157 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 SNCAP37840 140 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 LAMTOR1Q6IAA8 161 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 TMEM170AQ8WVE7 144 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 TXN2Q99757 166 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 CACNG5Q9UF02 275 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 GPR132Q9UNW8 380 aa12.09□□□□□ -0.47
COLCA2-207ENST00000639470 TRAV14DV4A0A0A6YYC5 116 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 OR4C46A6NHA9 309 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 CDS2O95674 445 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 AKAIN1P0CW23 69 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 TCF24Q7RTU0 167 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 RAB2BQ8WUD1 216 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 RRNAD1Q96FB5 475 aaKnown RBP12.08□□□□□ -0.48
COLCA2-207ENST00000639470 MAP6D1Q9H9H5 199 aa12.08□□□□□ -0.48
COLCA2-207ENST00000639470 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms