RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 CD177Q8N6Q3 437 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
SCARB2-216ENST00000639300 PIEZO2Q9H5I5 2752 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 MLNRO43193 412 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 CKS2P33552 79 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 Q6P435 159 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 RBFOX2O43251 390 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCARB2-216ENST00000639300 LCN2P80188 198 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 C16orf92Q96LL3 132 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 MYO18BQ8IUG5 2567 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 C9JQL5 133 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BKO60814 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 AMY1AP04745 511 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BJP06899 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 SOD3P08294 240 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 CD99P14209 185 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BOP23527 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BBP33778 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BDP58876 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BCP62807 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST2H2BEQ16778 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-216ENST00000639300 MBD3L1Q8WWY6 194 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BHQ93079 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BNQ99877 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 HIST1H2BMQ99879 126 aa11.97□□□□□ -0.49
SCARB2-216ENST00000639300 RNASE7Q9H1E1 156 aaKnown RBP11.97□□□□□ -0.49
SCARB2-216ENST00000639300 FOXA2Q9Y261 457 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-216ENST00000639300 MUC21A0A0G2JKD1 596 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 MUC21A0A140T8X8 626 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 WIPF3A6NGB9 483 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 IGKV1D-33P01593 117 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 IGKV1-33P01594 117 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 PRB4P10163 310 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-216ENST00000639300 MUC21Q5SSG8 566 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 COQ2Q96H96 371 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 PTPN13Q12923 2485 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 TRAV3A0A0B4J244 114 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 LINC00473A8K010 186 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 ADCYAP1P18509 176 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 LEMD1Q68G75 181 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
SCARB2-216ENST00000639300 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
SCARB2-216ENST00000639300 CXCL1P09341 107 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 RPL7P18124 248 aaKnown RBP11.96□□□□□ -0.5
SCARB2-216ENST00000639300 CSRP1P21291 193 aaKnown RBP11.96□□□□□ -0.5
SCARB2-216ENST00000639300 ASCL4Q6XD76 172 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 CACNG8Q8WXS5 425 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 IL36BQ9NZH7 164 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 LINC00587B1AMM8 73 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.5
SCARB2-216ENST00000639300 SPATA45Q537H7 98 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 OCC1Q8TAD7 63 aa11.96□□□□□ -0.5
SCARB2-216ENST00000639300 PYYP10082 97 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 EFNB3Q15768 340 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 COLCA1Q6ZS62 124 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 SLC25A33Q9BSK2 321 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 M0QZK8 103 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 GGCTO75223 188 aaKnown RBP11.95□□□□□ -0.5
SCARB2-216ENST00000639300 KLRB1Q12918 225 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 SRSF7Q16629 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCARB2-216ENST00000639300 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
SCARB2-216ENST00000639300 PEX7O00628 323 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 ZNF207O43670 478 aaKnown RBP11.95□□□□□ -0.5
SCARB2-216ENST00000639300 HEPN1Q6WQI6 88 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 RPUSD1Q9UJJ7 312 aaKnown RBP11.95□□□□□ -0.5
SCARB2-216ENST00000639300 SLC25A15Q9Y619 301 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 PLXNB3Q9ULL4 1909 aa11.95□□□□□ -0.5
SCARB2-216ENST00000639300 SFTPCP11686 197 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 MYOD1P15172 320 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 METTL26Q96S19 204 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
SCARB2-216ENST00000639300 NMUP48645 174 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 ATP5J2P56134 94 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 FAM53AQ6NSI3 398 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-216ENST00000639300 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 Q1RN00 199 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 TANC1Q9C0D5 1861 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 WNK1Q9H4A3 2382 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 GFI1BQ5VTD9 330 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 MBNL2Q5VZF2 373 aaKnown RBP11.94□□□□□ -0.5
SCARB2-216ENST00000639300 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 GTF2H5Q6ZYL4 71 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 DMRTA2Q96SC8 542 aa11.94□□□□□ -0.5
SCARB2-216ENST00000639300 CDKN1AP38936 164 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 RELQ04864 619 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-216ENST00000639300 GGTLC1Q9BX51 225 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 WNT10AQ9GZT5 417 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 TRAV30A0A087WSZ9 112 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 ZNF503-AS2A6NEH8 195 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 TMEM50AO95807 157 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 CD69Q07108 199 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms