RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GAB2Q9UQC2 676 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 TCF19Q9Y242 345 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 HILPDAQ9Y5L2 63 aa4.19□□□□□ -1.74
SHMT1-211ENST00000618902 TRBV24-1A0A075B6N3 115 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 IGHV3-72A0A0B4J1Y9 119 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 IGKV1D-13A0A0B4J2D9 117 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SMCO3A2RU48 225 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 FAM24AA6NFZ4 105 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 C17orf112F2Z3M2 114 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM250H0YL14 139 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 H3BQ15 152 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 H3BUX3 64 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 KCNAB3O43448 404 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 GATCO43716 136 aaKnown RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 MPDU1O75352 247 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 AMY1AP04745 511 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SNRNP70P08621 437 aaKnown RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SRP19P09132 144 aaKnown RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 IGKV1-13P0DP09 117 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 HOXA5P20719 270 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 S100A2P29034 98 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 CEACAM6P40199 344 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SNRPEP62304 92 aaKnown RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 POLR2GP62487 172 aaKnown RBP eCLIP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 RPL19P84098 196 aaKnown RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF816Q0VGE8 651 aaPredicted RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 RPL39P5Q59GN2 51 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SLC25A24Q6NUK1 477 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF66Q6ZN08 573 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF818PQ6ZRF7 136 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 Q6ZS46 218 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF429Q86V71 674 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM219Q86XT9 240 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 DRAM1Q8N682 238 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 HSD17B11Q8NBQ5 300 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 IL1F10Q8WWZ1 152 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 RPEQ96AT9 228 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 GALMQ96C23 342 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 ANAPC16Q96DE5 110 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 RITA1Q96K30 269 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 CLCC1Q96S66 551 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 IMMP2LQ96T52 175 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 RNF5Q99942 180 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 ABHD14AQ9BUJ0 271 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 MRPL20Q9BYC9 149 aaKnown RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SMIM3Q9BZL3 60 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 MAGT1Q9H0U3 335 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 WFDC1Q9HC57 220 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.18□□□□□ -1.74
SHMT1-211ENST00000618902 PLA2G2EQ9NZK7 142 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 VAX2Q9UIW0 290 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 JPT1Q9UK76 154 aa4.18□□□□□ -1.74
SHMT1-211ENST00000618902 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 IGHV1-3A0A0C4DH29 117 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 SH2D7A6NKC9 451 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 C9JQL5 133 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 HSD17B6O14756 317 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 AGPAT2O15120 278 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CYB5BO43169 146 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 IGLV2-14P01704 120 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 SAA2P0DJI9 122 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CT45A6P0DMU7 189 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CT45A5P0DMU8 189 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CT45A7P0DMV0 189 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 MDKP21741 143 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CD1BP29016 333 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 RPL35P42766 123 aaKnown RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 PSMB3P49720 205 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 RND2P52198 227 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 PAX9P55771 341 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 EBI3Q14213 229 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 HNF4GQ14541 408 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 LBHQ53QV2 105 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM41BQ5BJD5 291 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CXorf66Q5JRM2 361 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 SPSB3Q6PJ21 355 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM182Q6ZP80 229 aaPredicted RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 Q6ZSV7 163 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF833PQ6ZTB9 187 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 SSX9Q7RTT3 188 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 LYG1Q8N1E2 194 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 Q8N6K4 173 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 ZNF383Q8NA42 475 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 OR10X1Q8NGY0 326 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 OR52E5Q8NH55 327 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 RNASE11Q8TAA1 199 aaKnown RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 EDARADDQ8WWZ3 215 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 GPR146Q96CH1 333 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 RBM14Q96PK6 669 aaKnown RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 HSD17B10Q99714 261 aaKnown RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 NABP2Q9BQ15 211 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 GPR61Q9BZJ8 451 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 TMEM231Q9H6L2 316 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 MANBALQ9NQG1 85 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 CCL28Q9NRJ3 127 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 KCNIP2Q9NS61 270 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 GAR1Q9NY12 217 aaKnown RBP4.17□□□□□ -1.74
SHMT1-211ENST00000618902 PSENENQ9NZ42 101 aa4.17□□□□□ -1.74
SHMT1-211ENST00000618902 PRR13Q9NZ81 148 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms