RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 MINOS1-NBL1R4GNA1 71 aa16.35■□□□□ 0.21
SDHA-220ENST00000617470 INAFM1C9JVW0 142 aa16.35■□□□□ 0.21
SDHA-220ENST00000617470 RNASE2P10153 161 aaKnown RBP16.35■□□□□ 0.21
SDHA-220ENST00000617470 BPIFB3P59826 476 aa16.35■□□□□ 0.21
SDHA-220ENST00000617470 DEFA5Q01523 94 aa16.35■□□□□ 0.21
SDHA-220ENST00000617470 BCL6BQ8N143 479 aaPredicted RBP16.35■□□□□ 0.21
SDHA-220ENST00000617470 SEC11CQ9BY50 192 aa16.35■□□□□ 0.21
SDHA-220ENST00000617470 BTBD17A6NE02 478 aa16.34■□□□□ 0.21
SDHA-220ENST00000617470 INS-IGF2F8WCM5 200 aa16.34■□□□□ 0.21
SDHA-220ENST00000617470 EIF3GO75821 320 aaKnown RBP eCLIP16.34■□□□□ 0.21
SDHA-220ENST00000617470 PSG5Q15238 335 aa16.34■□□□□ 0.21
SDHA-220ENST00000617470 TEX45Q8NA69 505 aa16.34■□□□□ 0.21
SDHA-220ENST00000617470 EIF5A2Q9GZV4 153 aaKnown RBP16.34■□□□□ 0.21
SDHA-220ENST00000617470 KIAA1456Q9P272 454 aa16.34■□□□□ 0.21
SDHA-220ENST00000617470 TIMM23O14925 209 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 WT1-ASQ06250 92 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 C2orf83Q53S99 150 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 DYNAPQ8N1N2 210 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 CFHR4Q92496 578 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 MALSU1Q96EH3 234 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 MGST2Q99735 147 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 CDC42EP3Q9UKI2 254 aa16.33■□□□□ 0.21
SDHA-220ENST00000617470 LSM4Q9Y4Z0 139 aaKnown RBP16.33■□□□□ 0.21
SDHA-220ENST00000617470 SMCO3A2RU48 225 aa16.33■□□□□ 0.2
SDHA-220ENST00000617470 PEA15Q15121 130 aa16.33■□□□□ 0.2
SDHA-220ENST00000617470 FFAR4Q5NUL3 377 aa16.33■□□□□ 0.2
SDHA-220ENST00000617470 PRSS8Q16651 343 aa16.32■□□□□ 0.2
SDHA-220ENST00000617470 LCN15Q6UWW0 184 aa16.32■□□□□ 0.2
SDHA-220ENST00000617470 AJUBAQ96IF1 538 aa16.32■□□□□ 0.2
SDHA-220ENST00000617470 SIGLEC9Q9Y336 463 aa16.32■□□□□ 0.2
SDHA-220ENST00000617470 RBFOX3A6NFN3 312 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 HBE1P02100 147 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 SRD5A1P18405 259 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 PPT1P50897 306 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 ATP5IP56385 69 aaPredicted RBP16.31■□□□□ 0.2
SDHA-220ENST00000617470 HABP2Q14520 560 aaPredicted RBP16.31■□□□□ 0.2
SDHA-220ENST00000617470 PBDC1Q9BVG4 233 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 MDFIC2A0A1B0GVS7 189 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 PLXNB1O43157 2135 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 MPDU1O75352 247 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 VENTXO95231 258 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 FBP1P09467 338 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 FGF8P55075 233 aaPredicted RBP16.31■□□□□ 0.2
SDHA-220ENST00000617470 DEFB112Q30KQ8 113 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 ZNF709Q8N972 641 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 GGTLC1Q9BX51 225 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 NPVFQ9HCQ7 196 aa16.31■□□□□ 0.2
SDHA-220ENST00000617470 C17orf112F2Z3M2 114 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 HAGHQ16775 308 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 FBLN7Q53RD9 439 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 CCDC144NLQ6NUI1 221 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.3■□□□□ 0.2
SDHA-220ENST00000617470 OR10G4Q8NGN3 311 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 OR10G9Q8NGN4 311 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 OR10G7Q8NGN6 311 aa16.3■□□□□ 0.2
SDHA-220ENST00000617470 FNDC10F2Z333 226 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 YIF1AO95070 293 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 DEFA4P12838 97 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 SSBP2P81877 361 aaPredicted RBP16.29■□□□□ 0.2
SDHA-220ENST00000617470 BTN1A1Q13410 526 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 ICAM4Q14773 271 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 MLANAQ16655 118 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 GCSAMLQ5JQS6 135 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 A0A1W2PN81 502 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 MAP1LC3B2A6NCE7 125 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 MBP02144 154 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 CHRNA7P36544 502 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 ERHP84090 104 aaKnown RBP16.29■□□□□ 0.2
SDHA-220ENST00000617470 C9orf139Q6ZV77 190 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 MMD2Q8IY49 270 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 SVBPQ8N300 66 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 RNF5Q99942 180 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 MAP1LC3BQ9GZQ8 125 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 SLC25A22Q9H936 323 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 METTL1Q9UBP6 276 aaKnown RBP16.29■□□□□ 0.2
SDHA-220ENST00000617470 NAV3Q8IVL0 2385 aa16.29■□□□□ 0.2
SDHA-220ENST00000617470 ANK3Q12955 4377 aaKnown RBP16.29■□□□□ 0.2
SDHA-220ENST00000617470 OOSP1A8MZH6 123 aa16.28■□□□□ 0.2
SDHA-220ENST00000617470 OPRK1P41145 380 aa16.28■□□□□ 0.2
SDHA-220ENST00000617470 ZNF506Q5JVG8 444 aa16.28■□□□□ 0.2
SDHA-220ENST00000617470 FBXL15Q9H469 300 aa16.28■□□□□ 0.2
SDHA-220ENST00000617470 IGLC7A0M8Q6 106 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 CD24P25063 80 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 SCGB2A2Q13296 93 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 MIC13Q5XKP0 118 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 PPP1R27Q86WC6 154 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 NKX6-2Q9C056 277 aaPredicted RBP16.27■□□□□ 0.2
SDHA-220ENST00000617470 SMDT1Q9H4I9 107 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 SLC39A9Q9NUM3 307 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 MTORP42345 2549 aa16.27■□□□□ 0.2
SDHA-220ENST00000617470 FCN1O00602 326 aa16.27■□□□□ 0.19
SDHA-220ENST00000617470 HMGB3O15347 200 aaKnown RBP16.27■□□□□ 0.19
SDHA-220ENST00000617470 OR13C7P0DN81 318 aa16.27■□□□□ 0.19
SDHA-220ENST00000617470 COMPP49747 757 aaPredicted RBP16.27■□□□□ 0.19
SDHA-220ENST00000617470 FAM122CQ6P4D5 195 aa16.27■□□□□ 0.19
SDHA-220ENST00000617470 TEPPQ6URK8 271 aa16.27■□□□□ 0.19
SDHA-220ENST00000617470 P2RX4Q99571 388 aa16.27■□□□□ 0.19
SDHA-220ENST00000617470 SLC35B3Q9H1N7 401 aa16.27■□□□□ 0.19
SDHA-220ENST00000617470 IGKV1OR2-108A0A075B7D4 117 aa16.26■□□□□ 0.19
SDHA-220ENST00000617470 CTXND1A0A1B0GTU2 59 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms