RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ST8SIA3O43173 380 aa16.91■□□□□ 0.3
MMP28-203ENST00000612672 MFAP4P55083 255 aa16.91■□□□□ 0.3
MMP28-203ENST00000612672 FXYD6Q9H0Q3 95 aa16.91■□□□□ 0.3
MMP28-203ENST00000612672 RNF167Q9H6Y7 350 aa16.91■□□□□ 0.3
MMP28-203ENST00000612672 CLEC5AQ9NY25 188 aa16.9■□□□□ 0.3
MMP28-203ENST00000612672 KNCNA6PVL3 124 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 SDC2P34741 201 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 HERV-K104P61576 105 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 PAFAH1B2P68402 229 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 MXD1Q05195 221 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 PVRIGQ6DKI7 326 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 STHQ8IWL8 128 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 CADM3Q8N126 398 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 MOB3AQ96BX8 217 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 TMEM56Q96MV1 263 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 RNF126Q9BV68 326 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 PRNDQ9UKY0 176 aa16.89■□□□□ 0.29
MMP28-203ENST00000612672 A0A1B0GU03 582 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 DNASE2O00115 360 aaPredicted RBP16.88■□□□□ 0.29
MMP28-203ENST00000612672 SNAPC5O75971 98 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 AMBPP02760 352 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 MIFP14174 115 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 RFX2P48378 723 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 C12orf74Q32Q52 190 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 TPRA1Q86W33 373 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 CSNK1G2-AS1Q8NCQ2 148 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 PINX1Q96BK5 328 aaKnown RBP16.88■□□□□ 0.29
MMP28-203ENST00000612672 CNBD2Q96M20 576 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 TXN2Q99757 166 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 EHFQ9NZC4 300 aa16.88■□□□□ 0.29
MMP28-203ENST00000612672 GNG7O60262 68 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 IGKV1-39P01597 117 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 IGKV1D-39P04432 117 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 UBE2UQ5VVX9 321 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 ZNF575Q86XF7 245 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 ZNF114Q8NC26 417 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 ZNF2Q9BSG1 426 aaPredicted RBP16.87■□□□□ 0.29
MMP28-203ENST00000612672 RABAC1Q9UI14 185 aa16.87■□□□□ 0.29
MMP28-203ENST00000612672 PUS1Q9Y606 427 aaKnown RBP eCLIP16.87■□□□□ 0.29
MMP28-203ENST00000612672 TRAV2A0A0B4J234 112 aa16.86■□□□□ 0.29
MMP28-203ENST00000612672 DHRS11Q6UWP2 260 aa16.86■□□□□ 0.29
MMP28-203ENST00000612672 POM121L12Q8N7R1 296 aa16.86■□□□□ 0.29
MMP28-203ENST00000612672 GINS3Q9BRX5 216 aa16.86■□□□□ 0.29
MMP28-203ENST00000612672 K7EQG2 157 aa16.85■□□□□ 0.29
MMP28-203ENST00000612672 EIF4EP06730 217 aaKnown RBP16.85■□□□□ 0.29
MMP28-203ENST00000612672 RPL11P62913 178 aaKnown RBP16.85■□□□□ 0.29
MMP28-203ENST00000612672 SPINK9Q5DT21 86 aa16.85■□□□□ 0.29
MMP28-203ENST00000612672 MRPL36Q9P0J6 103 aaKnown RBP16.85■□□□□ 0.29
MMP28-203ENST00000612672 ANAPC10Q9UM13 185 aa16.85■□□□□ 0.29
MMP28-203ENST00000612672 DNAH5Q8TE73 4624 aa16.85■□□□□ 0.29
MMP28-203ENST00000612672 DEFB131BA0A096LNP1 70 aa16.84■□□□□ 0.29
MMP28-203ENST00000612672 PMP2P02689 132 aa16.84■□□□□ 0.29
MMP28-203ENST00000612672 PSMB9P28065 219 aa16.84■□□□□ 0.29
MMP28-203ENST00000612672 PRCDQ00LT1 54 aa16.84■□□□□ 0.29
MMP28-203ENST00000612672 IDNKQ5T6J7 187 aa16.84■□□□□ 0.29
MMP28-203ENST00000612672 SEC22AQ96IW7 307 aa16.84■□□□□ 0.29
MMP28-203ENST00000612672 ZNF688P0C7X2 276 aa16.83■□□□□ 0.28
MMP28-203ENST00000612672 DUSP18Q8NEJ0 188 aa16.83■□□□□ 0.28
MMP28-203ENST00000612672 STXBP6Q8NFX7 210 aa16.83■□□□□ 0.28
MMP28-203ENST00000612672 FKBP11Q9NYL4 201 aa16.83■□□□□ 0.28
MMP28-203ENST00000612672 NACAE9PAV3 2078 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 A0A0A6YYH2 397 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 A6NJ64 397 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 CD5P06127 495 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 SPP1P10451 314 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 PPP5CP53041 499 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 IZUMO4Q1ZYL8 232 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 PHLDA2Q53GA4 152 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 MORN3Q6PF18 240 aaPredicted RBP16.82■□□□□ 0.28
MMP28-203ENST00000612672 ZNF600Q6ZNG1 722 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 DCANP1Q8TF63 244 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 BLOC1S6Q9UL45 172 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 TBC1D24Q9ULP9 559 aa16.82■□□□□ 0.28
MMP28-203ENST00000612672 HERC1Q15751 4861 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 GPR31O00270 319 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 CBX5P45973 191 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 SCAND1P57086 179 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 SPARTQ8N0X7 666 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 TSPAN14Q8NG11 270 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 BORCS5Q969J3 196 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 IFT46Q9NQC8 304 aa16.81■□□□□ 0.28
MMP28-203ENST00000612672 TMEM50AO95807 157 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 P0DMU3 169 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 FAM231AP0DMU4 169 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 FAM231CP0DMU5 169 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 IZUMO2Q6UXV1 221 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 GRAMD2BQ96HH9 432 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 TSC22D3Q99576 134 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 SSR3Q9UNL2 185 aa16.8■□□□□ 0.28
MMP28-203ENST00000612672 GABARAPL2P60520 117 aa16.79■□□□□ 0.28
MMP28-203ENST00000612672 LGALS9BQ3B8N2 356 aa16.79■□□□□ 0.28
MMP28-203ENST00000612672 TMEM41BQ5BJD5 291 aa16.79■□□□□ 0.28
MMP28-203ENST00000612672 Q6ZR54 194 aa16.79■□□□□ 0.28
MMP28-203ENST00000612672 MRGPRFQ96AM1 343 aa16.79■□□□□ 0.28
MMP28-203ENST00000612672 IGLV2-18A0A075B6J9 118 aa16.78■□□□□ 0.28
MMP28-203ENST00000612672 NAT1P18440 290 aa16.78■□□□□ 0.28
MMP28-203ENST00000612672 P2RY1P47900 373 aa16.78■□□□□ 0.28
MMP28-203ENST00000612672 HSPE1P61604 102 aaKnown RBP16.78■□□□□ 0.28
MMP28-203ENST00000612672 TBC1D26Q86UD7 250 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms