RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MEGF9Q9H1U4 602 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 NBEAP1P0C6P0 100 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 ATP5J2P56134 94 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 CD69Q07108 199 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 MUC21A0A0G2JKD1 596 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 MUC21A0A140T8X8 626 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 MUC21Q5SSG8 566 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 PILRAQ9UKJ1 303 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.11
CSMD1-217ENST00000602723 SCARF2Q96GP6 870 aaPredicted RBP8.15□□□□□ -1.11
CSMD1-217ENST00000602723 SEMA5BQ9P283 1151 aa8.15□□□□□ -1.11
CSMD1-217ENST00000602723 SERF1AO75920 110 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 OR10J3Q5JRS4 329 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 SSBP4Q9BWG4 385 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-217ENST00000602723 TMEM14DPA8MWL7 114 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 COX6B1P14854 86 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 NRXN2Q9P2S2 1712 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 NPIPB13A6NJU9 1138 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 CCL19Q99731 98 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 ABCA2Q9BZC7 2435 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 LOC105371267A0A1B0GV96 52 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 TRGV3P03979 118 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 C5orf30Q96GV9 206 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 A0A1W2PQF6 199 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 FTH1P19P0C7X4 201 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 H3BUT2 72 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 SRP19P09132 144 aaKnown RBP8.14□□□□□ -1.11
CSMD1-217ENST00000602723 CTSSP25774 331 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 ACP7Q6ZNF0 438 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
CSMD1-217ENST00000602723 TEX45Q8NA69 505 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 IFI6P09912 130 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 PRSS53Q2L4Q9 553 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 ZNF585BQ52M93 769 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 DUX3Q96PT4 197 aa8.14□□□□□ -1.11
CSMD1-217ENST00000602723 IGHV3-66A0A0C4DH42 116 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 ZP1P60852 638 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 IFI27L2Q9H2X8 130 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 PATE3B3GLJ2 98 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 SLC25A20O43772 301 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 COX5BP10606 129 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 IL9P15248 144 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 TOMM7Q9P0U1 55 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 FOXA2Q9Y261 457 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-217ENST00000602723 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 UCNP55089 124 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 OR4X2Q8NGF9 303 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 Q9H3A6 140 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 RBMY1BA6NDE4 496 aaKnown RBP8.13□□□□□ -1.11
CSMD1-217ENST00000602723 RBMY1EA6NEQ0 496 aaKnown RBP8.13□□□□□ -1.11
CSMD1-217ENST00000602723 RBMY1DP0C7P1 496 aaKnown RBP8.13□□□□□ -1.11
CSMD1-217ENST00000602723 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
CSMD1-217ENST00000602723 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.13□□□□□ -1.11
CSMD1-217ENST00000602723 FHL5Q5TD97 284 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 HAX1O00165 279 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 IGFBP2P18065 325 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 PAX2Q02962 417 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 CFAP161Q6P656 301 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 ZNF257Q9Y2Q1 563 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 PAX1P15863 534 aa8.13□□□□□ -1.11
CSMD1-217ENST00000602723 IGKV1D-42A0A075B6H8 117 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 KLF4O43474 513 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 NDUFAF3Q9BU61 184 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 NPFFR1Q9GZQ6 430 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 NHP2Q9NX24 153 aaKnown RBP8.12□□□□□ -1.11
CSMD1-217ENST00000602723 C1orf53Q5VUE5 145 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 FER1L6-AS1Q8NA97 138 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 ZNRF1Q8ND25 227 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 NKX2-8O15522 239 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 IGHV3-23P01764 117 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-217ENST00000602723 RNASEH2CQ8TDP1 164 aaKnown RBP8.12□□□□□ -1.11
CSMD1-217ENST00000602723 TRAV9-2A0A087WT02 112 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 VKORC1Q9BQB6 163 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 DENND4CQ5VZ89 1909 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 LINC00614P0C842 121 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 ATRAIDQ6UW56 229 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 FGF11Q92914 225 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 GDF15Q99988 308 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 IGHV1-69-2A0A0G2JMI3 117 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 FBLN7Q53RD9 439 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 TMEM74BQ9NUR3 256 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 S4R3C0 116 aa8.12□□□□□ -1.11
CSMD1-217ENST00000602723 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-217ENST00000602723 COX6A1P12074 109 aa8.11□□□□□ -1.11
CSMD1-217ENST00000602723 PLNP26678 52 aa8.11□□□□□ -1.11
CSMD1-217ENST00000602723 OSR1Q8TAX0 266 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-217ENST00000602723 ZFYVE26Q68DK2 2539 aa8.11□□□□□ -1.11
CSMD1-217ENST00000602723 MSGN1A6NI15 193 aa8.11□□□□□ -1.11
CSMD1-217ENST00000602723 LDLRAD2Q5SZI1 272 aa8.11□□□□□ -1.11
CSMD1-217ENST00000602723 FAM71F2Q6NXP2 309 aa8.11□□□□□ -1.11
CSMD1-217ENST00000602723 CACNG8Q8WXS5 425 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms