RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 KCTD21Q4G0X4 260 aa10.87□□□□□ -0.67
XRCC1-205ENST00000595789 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
XRCC1-205ENST00000595789 TBC1D26Q86UD7 250 aa10.87□□□□□ -0.67
XRCC1-205ENST00000595789 GBGT1Q8N5D6 347 aa10.87□□□□□ -0.67
XRCC1-205ENST00000595789 C11orf68Q9H3H3 251 aaKnown RBP10.87□□□□□ -0.67
XRCC1-205ENST00000595789 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
XRCC1-205ENST00000595789 APOHP02749 345 aaPredicted RBP10.86□□□□□ -0.67
XRCC1-205ENST00000595789 EIF4EP06730 217 aaKnown RBP10.86□□□□□ -0.67
XRCC1-205ENST00000595789 UCP3P55916 312 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 PVRIGQ6DKI7 326 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 LPCAT3Q6P1A2 487 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 TCF24Q7RTU0 167 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 H2BFWTQ7Z2G1 175 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 OR11H2Q8NH07 326 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 OR4A16Q8NH70 328 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 ST8SIA2Q92186 375 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 YIPF6Q96EC8 236 aa10.86□□□□□ -0.67
XRCC1-205ENST00000595789 C11orf45Q8TAV5 145 aa10.85□□□□□ -0.67
XRCC1-205ENST00000595789 MRGPRFQ96AM1 343 aa10.85□□□□□ -0.67
XRCC1-205ENST00000595789 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
XRCC1-205ENST00000595789 GNG7O60262 68 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 DFFBO76075 338 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 CD5P06127 495 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 P0C879 139 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 TSPAN5P62079 268 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 LSM3P62310 102 aaKnown RBP10.84□□□□□ -0.67
XRCC1-205ENST00000595789 PRR20EP86478 221 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 PRR20CP86479 221 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 PRR20DP86480 221 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 PRR20BP86481 221 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 PRR20AP86496 221 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 IZUMO4Q1ZYL8 232 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 FAM24BQ8N5W8 94 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 PINX1Q96BK5 328 aaKnown RBP10.84□□□□□ -0.67
XRCC1-205ENST00000595789 CMTM3Q96MX0 182 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
XRCC1-205ENST00000595789 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 A0A0B4J293 547 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 A0A1B0GU03 582 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 INS-IGF2F8WCM5 200 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 TMEM50AO95807 157 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 IGKV1-5P01602 117 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 GIG44P09565 113 aaPredicted RBP10.83□□□□□ -0.68
XRCC1-205ENST00000595789 S100GP29377 79 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 DEFB131AP59861 70 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 PAFAH1B2P68402 229 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 ERHP84090 104 aaKnown RBP10.83□□□□□ -0.68
XRCC1-205ENST00000595789 SPINK9Q5DT21 86 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 GINS3Q9BRX5 216 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 MFFQ9GZY8 342 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 FBXL17Q9UF56 701 aa10.83□□□□□ -0.68
XRCC1-205ENST00000595789 PUS1Q9Y606 427 aaKnown RBP eCLIP10.83□□□□□ -0.68
XRCC1-205ENST00000595789 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 DEFB4AO15263 64 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 ST8SIA3O43173 380 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
XRCC1-205ENST00000595789 APOA1P02647 267 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 NPBWR1P48145 328 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 TMEM187Q14656 261 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 RBMS2Q15434 407 aaKnown RBP10.82□□□□□ -0.68
XRCC1-205ENST00000595789 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 ZNF600Q6ZNG1 722 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 SNX29P2Q8IUI4 249 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 COMMD3Q9UBI1 195 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 DNAH2Q9P225 4427 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 KIAA1109Q2LD37 5005 aa10.82□□□□□ -0.68
XRCC1-205ENST00000595789 FAT2Q9NYQ8 4349 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 IFNA4P05014 189 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 ELK1P19419 428 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 RCVRNP35243 200 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 RND3P61587 244 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 LHFPL1Q86WI0 220 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 Q8NAQ8 132 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 MRPL36Q9P0J6 103 aaKnown RBP10.81□□□□□ -0.68
XRCC1-205ENST00000595789 AGRNO00468 2067 aa10.81□□□□□ -0.68
XRCC1-205ENST00000595789 M0QYG6 137 aa10.8□□□□□ -0.68
XRCC1-205ENST00000595789 DNASE2O00115 360 aaPredicted RBP10.8□□□□□ -0.68
XRCC1-205ENST00000595789 RNASE2P10153 161 aaKnown RBP10.8□□□□□ -0.68
XRCC1-205ENST00000595789 TCTAP57738 103 aa10.8□□□□□ -0.68
XRCC1-205ENST00000595789 MLANAQ16655 118 aa10.8□□□□□ -0.68
XRCC1-205ENST00000595789 C2CD4CQ8TF44 421 aa10.8□□□□□ -0.68
XRCC1-205ENST00000595789 TP53RKQ96S44 253 aa10.8□□□□□ -0.68
XRCC1-205ENST00000595789 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
XRCC1-205ENST00000595789 APLNQ9ULZ1 77 aa10.8□□□□□ -0.68
XRCC1-205ENST00000595789 SMIM31A0A1B0GVY4 71 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 K7EQG2 157 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 RBMY1A1P0DJD3 496 aaKnown RBP10.79□□□□□ -0.68
XRCC1-205ENST00000595789 RBMY1CP0DJD4 496 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 PI3P19957 117 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 SNCAP37840 140 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 ETV6P41212 452 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 RBMY1FQ15415 496 aaKnown RBP10.79□□□□□ -0.68
XRCC1-205ENST00000595789 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
XRCC1-205ENST00000595789 HRH4Q9H3N8 390 aa10.79□□□□□ -0.68
XRCC1-205ENST00000595789 HPGDSO60760 199 aa10.78□□□□□ -0.68
XRCC1-205ENST00000595789 CLN5O75503 358 aa10.78□□□□□ -0.68
XRCC1-205ENST00000595789 NPPCP23582 126 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms