RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 LYL1P12980 280 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 UCP1P25874 307 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 MRPS10P82664 201 aaKnown RBP13.46□□□□□ -0.25
SRSF1-208ENST00000584773 RBPMS2Q6ZRY4 209 aaKnown RBP13.46□□□□□ -0.25
SRSF1-208ENST00000584773 SLC16A13Q7RTY0 426 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 CCDC71LQ8N9Z2 235 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 LHFPL5Q8TAF8 219 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 ISOC1Q96CN7 298 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 SLIRPQ9GZT3 109 aaKnown RBP13.46□□□□□ -0.25
SRSF1-208ENST00000584773 DAZ1Q9NQZ3 744 aaKnown RBP13.46□□□□□ -0.25
SRSF1-208ENST00000584773 UBQLN2Q9UHD9 624 aa13.46□□□□□ -0.25
SRSF1-208ENST00000584773 IGHV3-49A0A0A0MS15 119 aa13.45□□□□□ -0.26
SRSF1-208ENST00000584773 ETV6P41212 452 aa13.45□□□□□ -0.26
SRSF1-208ENST00000584773 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
SRSF1-208ENST00000584773 Q6ZRM9 215 aa13.45□□□□□ -0.26
SRSF1-208ENST00000584773 SLC35G3Q8N808 338 aa13.45□□□□□ -0.26
SRSF1-208ENST00000584773 C5orf66Q9H5L9 145 aa13.45□□□□□ -0.26
SRSF1-208ENST00000584773 CTDSPLO15194 276 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 IFNA17P01571 189 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 AKAIN1P0CW23 69 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 MFAP4P55083 255 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
SRSF1-208ENST00000584773 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
SRSF1-208ENST00000584773 MEF2DQ14814 521 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 ATP6V0BQ99437 205 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 BCL7BQ9BQE9 202 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 NAA60Q9H7X0 242 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 PRR13Q9NZ81 148 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 C14orf166Q9Y224 244 aaKnown RBP13.44□□□□□ -0.26
SRSF1-208ENST00000584773 LYSTQ99698 3801 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 TENM2Q9NT68 2774 aa13.44□□□□□ -0.26
SRSF1-208ENST00000584773 TRAV25A0A0B4J276 109 aa13.43□□□□□ -0.26
SRSF1-208ENST00000584773 DISC1C4P0D8 188 aa13.43□□□□□ -0.26
SRSF1-208ENST00000584773 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
SRSF1-208ENST00000584773 HOXA1P49639 335 aaPredicted RBP13.43□□□□□ -0.26
SRSF1-208ENST00000584773 OR51S1Q8NGJ8 323 aa13.43□□□□□ -0.26
SRSF1-208ENST00000584773 RNASE11Q8TAA1 199 aaKnown RBP13.43□□□□□ -0.26
SRSF1-208ENST00000584773 GLYATL2Q8WU03 294 aa13.43□□□□□ -0.26
SRSF1-208ENST00000584773 IGHV3OR16-13A0A075B7E8 117 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 IGHV3-74A0A0B4J1X5 117 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 TEX13DA0A0J9YY54 714 aaPredicted RBP13.42□□□□□ -0.26
SRSF1-208ENST00000584773 ANKRD20A5PA0PJZ0 165 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 NOL3O60936 208 aaKnown RBP13.42□□□□□ -0.26
SRSF1-208ENST00000584773 YIF1AO95070 293 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
SRSF1-208ENST00000584773 TNFSF8P32971 234 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 RRNAD1Q96FB5 475 aaKnown RBP13.42□□□□□ -0.26
SRSF1-208ENST00000584773 NXF2Q9GZY0 626 aaKnown RBP13.42□□□□□ -0.26
SRSF1-208ENST00000584773 TMEM222Q9H0R3 208 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 MRPL36Q9P0J6 103 aaKnown RBP13.42□□□□□ -0.26
SRSF1-208ENST00000584773 GPR132Q9UNW8 380 aa13.42□□□□□ -0.26
SRSF1-208ENST00000584773 K7EMT4 169 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 TSPAN4O14817 238 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 GSTZ1O43708 216 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-208ENST00000584773 GNG7O60262 68 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 FCGR2BP31994 310 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-208ENST00000584773 MLANAQ16655 118 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 SELENOHQ8IZQ5 122 aaKnown RBP13.41□□□□□ -0.26
SRSF1-208ENST00000584773 MCFD2Q8NI22 146 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 TMEM230Q96A57 120 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 RNF2Q99496 336 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 SPAG8Q99932 426 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-208ENST00000584773 SOSTQ9BQB4 213 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 PDCD10Q9BUL8 212 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 SMPXQ9UHP9 88 aa13.41□□□□□ -0.26
SRSF1-208ENST00000584773 IGHV7-4-1A0A0J9YVY3 117 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 CRYM-AS1A6NIL9 109 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 CHEK1O14757 476 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 ATG12O94817 140 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 NXPH3O95157 252 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 CDS2O95674 445 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 SNCAP37840 140 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-208ENST00000584773 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 ODF3L2Q3SX64 289 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 GPR146Q96CH1 333 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 TXN2Q99757 166 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 RHPN1-AS1Q9BWJ2 59 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 GGTLC1Q9BX51 225 aa13.4□□□□□ -0.26
SRSF1-208ENST00000584773 FNDC4Q9H6D8 234 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-208ENST00000584773 IGKV3-7A0A075B6H7 116 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 LOC102724200A0A096LPH7 203 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-208ENST00000584773 FABP12A6NFH5 140 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 SURF2Q15527 256 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-208ENST00000584773 TMEM268Q5VZI3 342 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 PVRIGQ6DKI7 326 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 RBPMSQ93062 196 aaKnown RBP13.39□□□□□ -0.27
SRSF1-208ENST00000584773 OR10C1Q96KK4 312 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 CACNG5Q9UF02 275 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 APOHP02749 345 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-208ENST00000584773 TFPI2P48307 235 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 ZNF124Q15973 351 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 TMEM116Q8NCL8 245 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 DUSP18Q8NEJ0 188 aa13.39□□□□□ -0.27
SRSF1-208ENST00000584773 PRRT1Q99946 306 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms