RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 MARC2Q969Z3 335 aa10.57□□□□□ -0.72
GGA3-215ENST00000582821 GPR146Q96CH1 333 aa10.57□□□□□ -0.72
GGA3-215ENST00000582821 ZC4H2Q9NQZ6 224 aa10.57□□□□□ -0.72
GGA3-215ENST00000582821 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
GGA3-215ENST00000582821 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 ZNF320A2RRD8 509 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 ZNF785A8K8V0 405 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 CTSGP08311 255 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 AKR1C4P17516 323 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 ADMP35318 185 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 SNCAP37840 140 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 SUB1P53999 127 aaKnown RBP eCLIP10.56□□□□□ -0.72
GGA3-215ENST00000582821 MFAP4P55083 255 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 SRPXP78539 464 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
GGA3-215ENST00000582821 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
GGA3-215ENST00000582821 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 PIGBOS1A0A0B4J2F0 54 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 NDUFA4O00483 81 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 MT-CO2P00403 227 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
GGA3-215ENST00000582821 ANXA3P12429 323 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 BAK1Q16611 211 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 DYNLRB2Q8TF09 96 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 TMEM190Q8WZ59 177 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 SDHCQ99643 169 aaPredicted RBP10.55□□□□□ -0.72
GGA3-215ENST00000582821 CHRDL1Q9BU40 450 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 ENY2Q9NPA8 101 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 C19orf73Q9NVV2 129 aa10.55□□□□□ -0.72
GGA3-215ENST00000582821 MRPL27Q9P0M9 148 aaKnown RBP10.55□□□□□ -0.72
GGA3-215ENST00000582821 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 NAP1L6A6NFF2 107 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 K7EMT4 169 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 CORTO00230 105 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 EDN2P20800 178 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 Q56UQ5 140 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 NMSQ5H8A3 153 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 ZNF57Q68EA5 555 aaPredicted RBP10.54□□□□□ -0.72
GGA3-215ENST00000582821 LGI3Q8N145 548 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 UXS1Q8NBZ7 420 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 CACNG5Q9UF02 275 aa10.54□□□□□ -0.72
GGA3-215ENST00000582821 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 IGHV3-35A0A0C4DH35 117 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 DUXBA0A1W2PPF3 345 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 SULT1A3P0DMM9 295 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 SULT1A4P0DMN0 295 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 HOXA1P49639 335 aaPredicted RBP10.53□□□□□ -0.72
GGA3-215ENST00000582821 CCR6P51684 374 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 LRTM2Q8N967 370 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 MLXQ9UH92 298 aa10.53□□□□□ -0.72
GGA3-215ENST00000582821 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
GGA3-215ENST00000582821 C15orf62A8K5M9 175 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 NUPL2O15504 423 aaKnown RBP10.52□□□□□ -0.73
GGA3-215ENST00000582821 HTR2BP41595 481 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 NPBWR1P48145 328 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
GGA3-215ENST00000582821 RBMS2Q15434 407 aaKnown RBP10.52□□□□□ -0.73
GGA3-215ENST00000582821 C2orf83Q53S99 150 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 TRIQKQ629K1 86 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 C11orf87Q6NUJ2 197 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 LYZL2Q7Z4W2 148 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 TMED4Q7Z7H5 227 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 SBSPONQ8IVN8 264 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 PINX1Q96BK5 328 aaKnown RBP10.52□□□□□ -0.73
GGA3-215ENST00000582821 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
GGA3-215ENST00000582821 PRR13Q9NZ81 148 aa10.52□□□□□ -0.73
GGA3-215ENST00000582821 A0A1B0GU03 582 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 TMEM50AO95807 157 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 INPP1P49441 399 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 UBE2MP61081 183 aaKnown RBP10.51□□□□□ -0.73
GGA3-215ENST00000582821 SMCO1Q147U7 214 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 TMEM61Q8N0U2 210 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 CENPSQ8N2Z9 138 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 ASCL2Q99929 193 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 C7orf50Q9BRJ6 194 aaKnown RBP10.51□□□□□ -0.73
GGA3-215ENST00000582821 FNDC4Q9H6D8 234 aaPredicted RBP10.51□□□□□ -0.73
GGA3-215ENST00000582821 HEYLQ9NQ87 328 aaPredicted RBP10.51□□□□□ -0.73
GGA3-215ENST00000582821 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 U3KQK5 164 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 TENM3Q9P273 2699 aa10.51□□□□□ -0.73
GGA3-215ENST00000582821 CEBPZOSA8MTT3 80 aa10.5□□□□□ -0.73
GGA3-215ENST00000582821 GNG7O60262 68 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 300.6 ms