RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 NKX2-1P43699 371 aaPredicted RBP4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 MAP2K4P45985 399 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 RPS27AP62979 156 aaKnown RBP4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 CDK10Q15131 360 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 LEMD1Q68G75 181 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 LAMTOR1Q6IAA8 161 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 SLC25A42Q86VD7 318 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 VKORC1L1Q8N0U8 176 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 ARHGAP24Q8N264 748 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 EEF1AKMT3Q96AZ1 226 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 CCDC124Q96CT7 223 aaKnown RBP4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 NEDD4LQ96PU5 975 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 GABARAPL3Q9BY60 117 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 Q9N2K0 584 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 DAZ1Q9NQZ3 744 aaKnown RBP4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 SMPXQ9UHP9 88 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 AK3Q9UIJ7 227 aa4.42□□□□□ -1.7
PPP4R1-216ENST00000580283 IGKV3-7A0A075B6H7 116 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 IGHV3-49A0A0A0MS15 119 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 NBDYA0A0U1RRE5 68 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 G3V2T6 193 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 K7EMT4 169 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 DYNC1I1O14576 645 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 CD2P06729 351 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 MNAT1P51948 309 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 GBX2P52951 348 aaPredicted RBP4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 TMEM50BP56557 158 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 PPP3R1P63098 170 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 HLA-DRB3P79483 266 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 UNC119Q13432 240 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 VMA21Q3ZAQ7 101 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 PLET1Q6UQ28 207 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 MMD2Q8IY49 270 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 JAGN1Q8N5M9 183 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 OR6M1Q8NGM8 313 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 ZNRF2Q8NHG8 242 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 SETD6Q8TBK2 473 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 VGLL1Q99990 258 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 URM1Q9BTM9 101 aaKnown RBP4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 C6orf62Q9GZU0 229 aaPredicted RBP4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 GABARAPL1Q9H0R8 117 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 OR2D2Q9H210 308 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 AMBNQ9NP70 447 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 CLEC5AQ9NY25 188 aa4.41□□□□□ -1.7
PPP4R1-216ENST00000580283 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 IGHV3-74A0A0B4J1X5 117 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 OR2T8A6NH00 312 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 FOXI3A8MTJ6 420 aaPredicted RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 NDUFA4O00483 81 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 SOCS1O15524 211 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 TGOLN2O43493 480 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 MRPS14O60783 128 aaKnown RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 SMR3BP02814 79 aaPredicted RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 DEFB131AP59861 70 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 RPL30P62888 115 aaKnown RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 QRFPP83859 136 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 OR2G6Q5TZ20 316 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 GLT8D1Q68CQ7 371 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 RPL22L1Q6P5R6 122 aaKnown RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 MORN3Q6PF18 240 aaPredicted RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 CDH26Q8IXH8 852 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 PUSL1Q8N0Z8 303 aaKnown RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 OR52I1Q8NGK6 324 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 TMEM167AQ8TBQ9 72 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 TRUB1Q8WWH5 349 aaKnown RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 THTPAQ9BU02 230 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 RHPN1-AS1Q9BWJ2 59 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 TM2D1Q9BX74 207 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 YTHDF1Q9BYJ9 559 aaKnown RBP4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 OR51E2Q9H255 320 aa4.4□□□□□ -1.71
PPP4R1-216ENST00000580283 IGHV7-4-1A0A0J9YVY3 117 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 DFFBO76075 338 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 KBTBD11O94819 623 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 CTSGP08311 255 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 RRASP10301 218 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 RPL27AP46776 148 aaKnown RBP4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 ETV1P50549 477 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 CMC4P56277 68 aaPredicted RBP4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 MRPL28Q13084 256 aaKnown RBP4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 ATP6AP1Q15904 470 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 RTL8BQ17RB0 113 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 CCDC58Q4VC31 144 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 MOB1BQ7L9L4 216 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 SPATA24Q86W54 205 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 GIMAP1Q8WWP7 306 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 PGLYRP3Q96LB9 341 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 CXorf58Q96LI9 332 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 CABLES2Q9BTV7 478 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 C20orf24Q9BUV8 137 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 FAM107BQ9H098 131 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 PLEKHJ1Q9NW61 149 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 IMPAD1Q9NX62 359 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 TBC1D24Q9ULP9 559 aa4.39□□□□□ -1.71
PPP4R1-216ENST00000580283 TRBV6-7A0A0A0MS04 114 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms