RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 DSPPQ9NZW4 1301 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TMEM189A5PLL7 270 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 J3QT63 122 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 GNGT2O14610 69 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 ZNF806P0C7X5 589 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 ZNF708P17019 499 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TCN2P20062 427 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 MYCNOSP40205 109 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 VDAC2P45880 294 aaPredicted RBP3.05□□□□□ -1.92
NUP88-213ENST00000576862 REG1BP48304 166 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 H2BFSP57053 126 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TAF9Q16594 264 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 KDM4DQ6B0I6 523 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 GUSBP11Q6P575 273 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 Q6ZN92 141 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TMPPEQ6ZT21 453 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 GOLT1AQ6ZVE7 132 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 ZNF550Q7Z398 422 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 PDZD9Q8IXQ8 264 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TMEM61Q8N0U2 210 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 MUC15Q8N387 334 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TMEM105Q8N8V8 129 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 OR10G2Q8NGC3 310 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 OR9G1Q8NH87 305 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 GNPDA2Q8TDQ7 276 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 BLNKQ8WV28 456 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 GEMIN6Q8WXD5 167 aaKnown RBP3.05□□□□□ -1.92
NUP88-213ENST00000576862 HES4Q9HCC6 221 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 BCL2L10Q9HD36 194 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 CCL28Q9NRJ3 127 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 CALYQ9NYX4 217 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 NUFIP1Q9UHK0 495 aaKnown RBP3.05□□□□□ -1.92
NUP88-213ENST00000576862 HSPB8Q9UJY1 196 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 GNG8Q9UK08 70 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 RBM7Q9Y580 266 aaKnown RBP3.05□□□□□ -1.92
NUP88-213ENST00000576862 YTHDF2Q9Y5A9 579 aaKnown RBP3.05□□□□□ -1.92
NUP88-213ENST00000576862 ENPP4Q9Y6X5 453 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 TRPM6Q9BX84 2022 aa3.05□□□□□ -1.92
NUP88-213ENST00000576862 IGKV3D-11A0A0A0MRZ8 115 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 TRAV8-2A0A0B4J237 113 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 ARRDC5A6NEK1 342 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 AIPO00170 330 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 CLPSP04118 112 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 IFI6P09912 130 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 UBBP0CG47 229 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 PRTN3P24158 256 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 S100A7P31151 101 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 S100A11P31949 105 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 GABRA3P34903 492 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 BTG2P78543 158 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 PRR3P79522 188 aaKnown RBP3.04□□□□□ -1.92
NUP88-213ENST00000576862 HOXC5Q00444 222 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 EIF4EBP1Q13541 118 aaPredicted RBP3.04□□□□□ -1.92
NUP88-213ENST00000576862 TTC32Q5I0X7 151 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 NAA40Q86UY6 237 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 C20orf196Q8IYI0 205 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 SAXO1Q8IYX7 474 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 H1FOOQ8IZA3 346 aaPredicted RBP3.04□□□□□ -1.92
NUP88-213ENST00000576862 C8orf59Q8N0T1 100 aaPredicted RBP3.04□□□□□ -1.92
NUP88-213ENST00000576862 ZNF615Q8N8J6 731 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 OR52R1Q8NGF1 315 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 OR8S1Q8NH09 359 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 OR4C6Q8NH72 309 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 OR1S1Q8NH92 325 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 TSLPQ969D9 159 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 GABARAPL3Q9BY60 117 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 CXorf21Q9HAI6 301 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 NIT2Q9NQR4 276 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 GPR84Q9NQS5 396 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 DHCR7Q9UBM7 475 aaKnown RBP3.04□□□□□ -1.92
NUP88-213ENST00000576862 SSR3Q9UNL2 185 aa3.04□□□□□ -1.92
NUP88-213ENST00000576862 NCOR1O75376 2440 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 MEIKINA0A087WXM9 373 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 IGHV5-10-1A0A0J9YXX1 117 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 A0A0X1KG70 313 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 LOC100130705A0A1B0GUX0 176 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 hADV38S2A0JD32 116 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 TRAPPC13A5PLN9 417 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 H3BSA7 217 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 H7C1C5 153 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 M0R129 80 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 AGPAT2O15120 278 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 KCNK2O95069 426 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 IGKV1D-16P01601 117 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 REG1AP05451 166 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 LGALS1P09382 135 aaKnown RBP3.03□□□□□ -1.92
NUP88-213ENST00000576862 OR4A8P0C604 315 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ORM2P19652 201 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 RPS4Y1P22090 263 aaKnown RBP3.03□□□□□ -1.92
NUP88-213ENST00000576862 CRHBPP24387 322 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 FMO3P31513 532 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 GLRXP35754 106 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 TDGF1P3P51864 188 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ZNF136P52737 540 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 LCN6P62502 163 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms