RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 UQCC1Q9NVA1 299 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CEP295Q9C0D2 2601 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 MED13Q9UHV7 2174 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 DMXL1Q9Y485 3027 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 A0A087WUU8 490 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 A0A1W2PRE2 83 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 KLLNB2CW77 178 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 UPK2O00526 184 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 HMGB3O15347 200 aaKnown RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ORC5O43913 435 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TPST1O60507 370 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CTLA4P16410 223 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CCL1P22362 96 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TALDO1P37837 337 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 AKR1C3P42330 323 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 RPL23P62829 140 aaKnown RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 GNG5P63218 68 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CXCL6P80162 114 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 MEF2CQ06413 473 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TMEM267Q0VDI3 215 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TBPL2Q6SJ96 375 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ATP5L2Q7Z4Y8 100 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 DEFB125Q8N687 156 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ZIC4Q8N9L1 334 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ZNF439Q8NDP4 499 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 SPTSSAQ969W0 71 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 KCNS1Q96KK3 526 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ERMAPQ96PL5 475 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 GPX7Q96SL4 187 aaPredicted RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 SLC25A2Q9BXI2 301 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 MRPL20Q9BYC9 149 aaKnown RBP3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 OR51I2Q9H344 312 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 ZNF702PQ9H963 129 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 SCN3BQ9NY72 215 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CACNG5Q9UF02 275 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 INSIG2Q9Y5U4 225 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 FLVCR1Q9Y5Y0 555 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 HSPE1-MOB4S4R3N1 261 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 CHD6Q8TD26 2715 aa3.85□□□□□ -1.79
VPS35P1-201ENST00000563400 DNAH14Q0VDD8 3507 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 DMDP11532 3685 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 CPAMD8Q8IZJ3 1885 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 BAHCC1Q9P281 2608 aa3.84□□□□□ -1.79
VPS35P1-201ENST00000563400 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 A0A0G2JMM0 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 A0A1W2PPB8 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 A0A1W2PRS3 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 hADV38S2A0JD32 116 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 OR5H1A6NKK0 313 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 KIR3DP1A8MWS1 328 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 H3BSA7 217 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 M0R1X1 148 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 MMP23AO75900 390 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 IGHMP01871 453 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 C1QBP02746 253 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 SYNJ2BPP57105 145 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 DAD1P61803 113 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 CDK5Q00535 292 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 RPL18Q07020 188 aaKnown RBP3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 ZNF404Q494X3 552 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 KLHL12Q53G59 568 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 FAM27BQ5VT28 67 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 C20orf196Q8IYI0 205 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 TEX29Q8N6K0 151 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 STARD4Q96DR4 205 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 TSSK6Q9BXA6 273 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 OR52D1Q9H346 318 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 SLC25A22Q9H936 323 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 JPT1Q9UK76 154 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 PRNDQ9UKY0 176 aa3.84□□□□□ -1.8
VPS35P1-201ENST00000563400 ZNF432O94892 652 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 BGLAPP02818 100 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 PRB1P04280 392 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 KLK2P20151 261 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 GADD45AP24522 165 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 GRB2P62993 217 aaKnown RBP3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 HOXC5Q00444 222 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 IFITM3Q01628 133 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 ARFRP1Q13795 201 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 TWIST1Q15672 202 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 PRR30Q53SZ7 412 aaPredicted RBP3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 Q6ZRU5 148 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 GOLT1AQ6ZVE7 132 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 DRAM1Q8N682 238 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 C9orf106Q8NAJ2 232 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 NPRL2Q8WTW4 380 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 ITLN2Q8WWU7 325 aaPredicted RBP3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 RASL12Q9NYN1 266 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 FAM215AQ9Y5M1 114 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 IER3IP1Q9Y5U9 82 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 IGF2RP11717 2491 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 CHD8Q9HCK8 2581 aa3.83□□□□□ -1.8
VPS35P1-201ENST00000563400 CACNA1GO43497 2377 aa3.82□□□□□ -1.8
VPS35P1-201ENST00000563400 GTF3C1Q12789 2109 aa3.82□□□□□ -1.8
VPS35P1-201ENST00000563400 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
VPS35P1-201ENST00000563400 IGHV2-26A0A0B4J1V2 119 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms