RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ADAT1Q9BUB4 502 aaKnown RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 DERL1Q9BUN8 251 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 PDFQ9HBH1 243 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 TNFRSF19Q9NS68 423 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF586Q9NXT0 402 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 NAT8BQ9UHF3 227 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 ZNF230Q9UIE0 474 aaPredicted RBP1.41□□□□□ -2.18
RTF1-207ENST00000561076 HIGD1AQ9Y241 93 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 RTL9Q8NET4 1388 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 MED23Q9ULK4 1368 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 FRMPD1Q5SYB0 1578 aa1.41□□□□□ -2.18
RTF1-207ENST00000561076 IGSF9BQ9UPX0 1349 aa1.4□□□□□ -2.18
RTF1-207ENST00000561076 CLIP1P30622 1438 aa1.4□□□□□ -2.18
RTF1-207ENST00000561076 SMG6Q86US8 1419 aaKnown RBP1.4□□□□□ -2.18
RTF1-207ENST00000561076 CDK13Q14004 1512 aaKnown RBP1.4□□□□□ -2.18
RTF1-207ENST00000561076 CEP152O94986 1710 aa1.4□□□□□ -2.18
RTF1-207ENST00000561076 CHD2O14647 1828 aaKnown RBP1.4□□□□□ -2.18
RTF1-207ENST00000561076 CEP170BQ9Y4F5 1589 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 MED14O60244 1454 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 CAMSAP2Q08AD1 1489 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 MLH3Q9UHC1 1453 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 RFX7Q2KHR2 1363 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IGLV4-69A0A075B6H9 119 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 A0A087WUU8 490 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 A0A096LNJ9 63 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IGHV3-73A0A0B4J1V6 119 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1-12A0A0C4DH73 117 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 LOC102725191A0A1B0GVB3 256 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 PINLYPA6NC86 204 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 LINC00587B1AMM8 73 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 GABARAPH6UMI1 98 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TP53I11O14683 189 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 OVOL1O14753 267 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 LEPROTO15243 131 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 NDUFB3O43676 98 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 NAPSAO96009 420 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 NPYP01303 97 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1D-33P01593 117 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1-33P01594 117 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1D-12P01611 117 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 C1QAP02745 245 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 C1QCP02747 245 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 MT-ND6P03923 174 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 GIG44P09565 113 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 ZNF883P0CG24 379 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 NFYAP23511 347 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 HLA-DMBP28068 263 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 SRIP30626 198 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TGFBR1P36897 503 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TMBIM6P55061 237 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TSPEAR-AS2P59090 65 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 COPZ1P61923 177 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 RRAS2P62070 204 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 RPS11P62280 158 aaKnown RBP eCLIP1.4□□□□□ -2.19
RTF1-207ENST00000561076 GNB2P62879 340 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 RHOGP84095 191 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 PSG9Q00887 426 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 HIST1H1AQ02539 215 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 HES1Q14469 280 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 ZNF141Q15928 474 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TAF9Q16594 264 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 MORN2Q502X0 79 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 C14orf177Q52M58 125 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 KHDC3LQ587J8 217 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 DNLZQ5SXM8 178 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 C1orf140Q5VVS0 124 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 HRCT1Q6UXD1 115 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 UNQ9165/PRO28630Q6UXU0 137 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 ZFP2Q6ZN57 461 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 Q6ZQT7 251 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 Q6ZTC4 211 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 MIR17HGQ75NE6 70 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 LINC00305Q7Z4B0 112 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 ZNF101Q8IZC7 436 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 C11orf42Q8N5U0 333 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TMEM105Q8N8V8 129 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 APCDD1LQ8NCL9 501 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 OR5D16Q8NGK9 328 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 OR5C1Q8NGR4 320 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 OR4C6Q8NH72 309 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 SLAMF6Q96DU3 332 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 IP6K3Q96PC2 410 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 GPX7Q96SL4 187 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 PRADC1Q9BSG0 188 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 OR8D2Q9GZM6 311 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 AICDAQ9GZX7 198 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 LPAR5Q9H1C0 372 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 ASF1BQ9NVP2 202 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 TXNL4BQ9NX01 149 aaKnown RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 MARCOQ9UEW3 520 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 TIMM9Q9Y5J7 89 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 WDR81Q562E7 1941 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 RAI1Q7Z5J4 1906 aaPredicted RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 RNF17Q9BXT8 1623 aaKnown RBP1.4□□□□□ -2.19
RTF1-207ENST00000561076 BIVM-ERCC5R4GMW8 1640 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.4□□□□□ -2.19
RTF1-207ENST00000561076 OVOS2A0A0G2JMS6 1433 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 BCL9O00512 1426 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 NAIPQ13075 1403 aa1.4□□□□□ -2.19
RTF1-207ENST00000561076 PIKFYVEQ9Y2I7 2098 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms