RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 LHFPL5Q8TAF8 219 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 SMIM4Q8WVI0 70 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 BSCL2Q96G97 398 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-208ENST00000558827 SPATA25Q9BR10 227 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 MRPL27Q9P0M9 148 aaKnown RBP9.38□□□□□ -0.91
SMAD3-208ENST00000558827 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
SMAD3-208ENST00000558827 RYR3Q15413 4870 aa9.38□□□□□ -0.91
SMAD3-208ENST00000558827 CTSGP08311 255 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 P0C879 139 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 AKAIN1P0CW23 69 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 TFPI2P48307 235 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-208ENST00000558827 MFAP4P55083 255 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 MEF2DQ14814 521 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 SLC16A13Q7RTY0 426 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 CADM3Q8N126 398 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 RRNAD1Q96FB5 475 aaKnown RBP9.37□□□□□ -0.91
SMAD3-208ENST00000558827 ZNF414Q96IQ9 312 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 SLIRPQ9GZT3 109 aaKnown RBP9.37□□□□□ -0.91
SMAD3-208ENST00000558827 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 MCUBQ9NWR8 336 aa9.37□□□□□ -0.91
SMAD3-208ENST00000558827 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 C3orf84H3BNL1 204 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 NDUFA4O00483 81 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 NUPL2O15504 423 aaKnown RBP9.36□□□□□ -0.91
SMAD3-208ENST00000558827 LYL1P12980 280 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 UCP1P25874 307 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 SNCAP37840 140 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 MRPS10P82664 201 aaKnown RBP9.36□□□□□ -0.91
SMAD3-208ENST00000558827 CASC10Q5T4H9 136 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 LINC00322Q6ZN03 302 aaPredicted RBP9.36□□□□□ -0.91
SMAD3-208ENST00000558827 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
SMAD3-208ENST00000558827 OR1L6Q8NGR2 347 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 GPR146Q96CH1 333 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 PDCD10Q9BUL8 212 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 HIPK2Q9H2X6 1198 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 NAA60Q9H7X0 242 aa9.36□□□□□ -0.91
SMAD3-208ENST00000558827 MRPL36Q9P0J6 103 aaKnown RBP9.36□□□□□ -0.91
SMAD3-208ENST00000558827 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
SMAD3-208ENST00000558827 IGHV3-66A0A0C4DH42 116 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 ANKRD20A5PA0PJZ0 165 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 CTDSPLO15194 276 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 GNG7O60262 68 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-208ENST00000558827 SSBP1Q04837 148 aaKnown RBP9.35□□□□□ -0.91
SMAD3-208ENST00000558827 TMEM268Q5VZI3 342 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 SPSB3Q6PJ21 355 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 GBGT1Q8N5D6 347 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 GLYATL2Q8WU03 294 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 MARC2Q969Z3 335 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 EDA2RQ9HAV5 297 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 ENY2Q9NPA8 101 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 DAZ1Q9NQZ3 744 aaKnown RBP9.35□□□□□ -0.91
SMAD3-208ENST00000558827 GPR132Q9UNW8 380 aa9.35□□□□□ -0.91
SMAD3-208ENST00000558827 ATG12O94817 140 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
SMAD3-208ENST00000558827 AKR1C4P17516 323 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 PYDC2Q56P42 97 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 RNF2Q99496 336 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 SOSTQ9BQB4 213 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 BCL7BQ9BQE9 202 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 RHPN1-AS1Q9BWJ2 59 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 CACNG5Q9UF02 275 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 RSL24D1Q9UHA3 163 aaKnown RBP9.34□□□□□ -0.91
SMAD3-208ENST00000558827 SMPXQ9UHP9 88 aa9.34□□□□□ -0.91
SMAD3-208ENST00000558827 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 CRYM-AS1A6NIL9 109 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 GSTZ1O43708 216 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-208ENST00000558827 CDS2O95674 445 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-208ENST00000558827 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
SMAD3-208ENST00000558827 ZNF124Q15973 351 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 ANKRD55Q3KP44 614 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 TOMM20LQ6UXN7 152 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 TMEM116Q8NCL8 245 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 DUSP18Q8NEJ0 188 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 PRRT1Q99946 306 aa9.33□□□□□ -0.92
SMAD3-208ENST00000558827 NXF2Q9GZY0 626 aaKnown RBP9.33□□□□□ -0.92
SMAD3-208ENST00000558827 FNDC4Q9H6D8 234 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-208ENST00000558827 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-208ENST00000558827 IGHV7-4-1A0A0J9YVY3 117 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 CEBPZOSA8MTT3 80 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 K7EMT4 169 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 CHEK1O14757 476 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 TMEM50AO95807 157 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 OPRK1P41145 380 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 DHODHQ02127 395 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 RELQ04864 619 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-208ENST00000558827 LAMTOR1Q6IAA8 161 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 APRG1Q8IVJ8 170 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 LILRB2Q8N423 598 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 RBPMSQ93062 196 aaKnown RBP9.32□□□□□ -0.92
SMAD3-208ENST00000558827 TXN2Q99757 166 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms