RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 PMS2P11Q13670 270 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 GUK1Q16774 197 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 VMA21Q3ZAQ7 101 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TMEM41BQ5BJD5 291 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 C10orf91Q5T1B1 145 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 UTF1Q5T230 341 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 AVPI1Q5T686 147 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 RBMS3Q6XE24 437 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 C18orf65Q6ZTR6 163 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 HAPLN4Q86UW8 402 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 VKORC1L1Q8N0U8 176 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 SVBPQ8N300 66 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TEX45Q8NA69 505 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 OR11H6Q8NGC7 330 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TMEM167AQ8TBQ9 72 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 MBD3L1Q8WWY6 194 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 NABP2Q9BQ15 211 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 SEC11CQ9BY50 192 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 MRPL20Q9BYC9 149 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 COMMD5Q9GZQ3 224 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 MS4A7Q9GZW8 240 aaPredicted RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 SLC35B3Q9H1N7 401 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 UBTD1Q9HAC8 227 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 PLEKHA3Q9HB20 300 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 NPVFQ9HCQ7 196 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 KCNIP2Q9NS61 270 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 SLC39A9Q9NUM3 307 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TCF19Q9Y242 345 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 TMA7Q9Y2S6 64 aaKnown RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 KLF2Q9Y5W3 355 aaPredicted RBP3.58□□□□□ -1.84
SRP54-212ENST00000556992 CRYBG3Q68DQ2 2970 aa3.58□□□□□ -1.84
SRP54-212ENST00000556992 HIVEP1P15822 2718 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 IGHV2-26A0A0B4J1V2 119 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 TRAV3A0A0B4J244 114 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 A0A1W2PN81 502 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 IFITM10A6NMD0 228 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 SRRM4A7MD48 611 aaKnown RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 C15orf62A8K5M9 175 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 OOSP1A8MZH6 123 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 LY6LH3BQJ8 138 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 RRHO14718 337 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 GAS8-AS1O95177 125 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 SNAPINO95295 136 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 SVILO95425 2214 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 CA2P00918 260 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 IFNA1P01562 189 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 IGKV1-16P04430 117 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 ARG1P05089 322 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 SFTA3P0C7M3 94 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 MDKP21741 143 aaPredicted RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 FGF7P21781 194 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 HTR1DP28221 377 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 CHRNA7P36544 502 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 GPX4P36969 197 aaPredicted RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 TAGLN2P37802 199 aaKnown RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 REG1BP48304 166 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 COMPP49747 757 aaPredicted RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 FHITP49789 147 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 ARF6P62330 175 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 PRCDQ00LT1 54 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 HLA-DRB5Q30154 266 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 ACOT6Q3I5F7 207 aaPredicted RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 C2orf83Q53S99 150 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 FREM1Q5H8C1 2179 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 MOB3BQ86TA1 216 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 KIR3DL3Q8N743 410 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 SLC24A4Q8NFF2 622 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 OR10G4Q8NGN3 311 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 OR10G9Q8NGN4 311 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 OR10G7Q8NGN6 311 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 CACNG8Q8WXS5 425 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 RPEQ96AT9 228 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 ZNF479Q96JC4 524 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 HARBI1Q96MB7 349 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 HINT2Q9BX68 163 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 ACTR3CQ9C0K3 210 aaPredicted RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 RPRMQ9NS64 109 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 KIAA1456Q9P272 454 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 DPM3Q9P2X0 92 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 ONECUT1Q9UBC0 465 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 WDR83OSQ9Y284 106 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 CARHSP1Q9Y2V2 147 aaKnown RBP3.57□□□□□ -1.84
SRP54-212ENST00000556992 KPTNQ9Y664 436 aa3.57□□□□□ -1.84
SRP54-212ENST00000556992 NAV3Q8IVL0 2385 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 IGHV1-3A0A0C4DH29 117 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 UBE2L5PA0A1B0GUS4 154 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 A0A1W2PPV4 95 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 SMCO3A2RU48 225 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 C19orf84I3L1E1 186 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 NDUFS8O00217 210 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 LY6HO94772 140 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 ACTL6BO94805 426 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 HSPB1P04792 205 aaKnown RBP3.56□□□□□ -1.84
SRP54-212ENST00000556992 SAA1P0DJI8 122 aaPredicted RBP3.56□□□□□ -1.84
SRP54-212ENST00000556992 NPY1RP25929 384 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 OPRK1P41145 380 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms