RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 CX3CL1P78423 397 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 CATR1Q13166 79 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 EBI3Q14213 229 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 SMCO1Q147U7 214 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 FXYD3Q14802 87 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PLGLAQ15195 96 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 MMDQ15546 238 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PRSS8Q16651 343 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 RTL8BQ17RB0 113 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 ECSCRQ19T08 205 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 LRRC75BQ2VPJ9 315 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 LGALSLQ3ZCW2 172 aaPredicted RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 MINOS1Q5TGZ0 78 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 LPCAT3Q6P1A2 487 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 C11orf88Q6PI97 169 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 TMEM182Q6ZP80 229 aaPredicted RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 H2BFWTQ7Z2G1 175 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 ZNF329Q86UD4 541 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 AKAP14Q86UN6 197 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 C5orf56Q8N8D9 126 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PRR26Q8N8Z3 221 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 LRTM2Q8N967 370 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 LFNGQ8NES3 379 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 NPBQ8NG41 125 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 OR2T35Q8NGX2 323 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 OR2T10Q8NGZ9 312 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 OR4S2Q8NH73 311 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 SPATA3Q8NHX4 192 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 COQ8AQ8NI60 647 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 TMEM167AQ8TBQ9 72 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PPP1R1CQ8WVI7 109 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 SSMEM1Q8WWF3 244 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 ZNF414Q96IQ9 312 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 C2orf50Q96LR7 162 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 SCGB3A2Q96PL1 93 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 OR2A7Q96R45 310 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PHB2Q99623 299 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PDCD10Q9BUL8 212 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PARP11Q9NR21 331 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 MBD2Q9UBB5 411 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 SHPKQ9UHJ6 478 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PAIP2BQ9ULR5 123 aaKnown RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 TCF19Q9Y242 345 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 PRELID3BQ9Y3B1 194 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 TBL2Q9Y4P3 447 aaKnown RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 AMMECR1Q9Y4X0 333 aaPredicted RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 OR51B2Q9Y5P1 312 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 MMP24Q9Y5R2 645 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 MINOS1-NBL1R4GNA1 71 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 TACC2O95359 2948 aa2.45□□□□□ -2.02
SEC23A-208ENST00000555017 TEP1Q99973 2627 aaKnown RBP2.45□□□□□ -2.02
SEC23A-208ENST00000555017 CREBBPQ92793 2442 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 HIVEP1P15822 2718 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 IGHV3OR16-8A0A075B7F1 116 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 IGLC7A0M8Q6 106 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 RNF222A6NCQ9 220 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 C15orf61A6NNL5 157 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 C15orf62A8K5M9 175 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 PMS2P5A8MQ11 134 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 RBFOX2O43251 390 aaKnown RBP eCLIP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 SYNGR2O43760 224 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 GPR137BO60478 399 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 PFDN1O60925 122 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 TSC22D2O75157 780 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 CRLF1O75462 422 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 CST7O76096 145 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 NDUFA3O95167 84 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 CFDP00746 253 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 IFNA17P01571 189 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 TRBV12-3P01733 135 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 IGHV3-11P01762 117 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 FBP1P09467 338 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 METTL15P1P0C7V9 234 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 OR13C7P0DN81 318 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 RNASE2P10153 161 aaKnown RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 ANXA3P12429 323 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 DEFA4P12838 97 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 HLA-GP17693 338 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 VDAC1P21796 283 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 GATA2P23769 480 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 PSMB6P28072 239 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 MC5RP33032 325 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 CEACAM3P40198 252 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 NKX2-1P43699 371 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 HOXA1P49639 335 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 DYNLT3P51808 116 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 UBE2KP61086 200 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 HSPE1P61604 102 aaKnown RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 RPL8P62917 257 aaKnown RBP2.44□□□□□ -2.02
SEC23A-208ENST00000555017 TNFRSF9Q07011 255 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 POU2AF1Q16633 256 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 C5orf64Q2M2E5 130 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 TMEM30BQ3MIR4 351 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 TCTEX1D4Q5JR98 221 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 SPANXN5Q5MJ07 72 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 OR8G2PQ6IF36 304 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 PPP1R27Q86WC6 154 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 PDPNQ86YL7 162 aa2.44□□□□□ -2.02
SEC23A-208ENST00000555017 OR8H3Q8N146 312 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms