RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 VSIRQ9H7M9 311 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 RAB26Q9ULW5 256 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 DBX1A6NMT0 343 aa17.64■□□□□ 0.41
FOXA1-204ENST00000554607 TMEM41BQ5BJD5 291 aa17.64■□□□□ 0.41
FOXA1-204ENST00000554607 LINC00336Q6ZUF6 198 aa17.64■□□□□ 0.41
FOXA1-204ENST00000554607 STHQ8IWL8 128 aa17.64■□□□□ 0.41
FOXA1-204ENST00000554607 CENPSQ8N2Z9 138 aa17.64■□□□□ 0.41
FOXA1-204ENST00000554607 OR4A16Q8NH70 328 aa17.64■□□□□ 0.41
FOXA1-204ENST00000554607 FAM212BQ9NTI7 297 aaPredicted RBP17.64■□□□□ 0.41
FOXA1-204ENST00000554607 XRCC3O43542 346 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 S100GP29377 79 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 TAS2R46P59540 309 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 RPL11P62913 178 aaKnown RBP17.63■□□□□ 0.41
FOXA1-204ENST00000554607 LEMD1Q68G75 181 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 TOMM20LQ6UXN7 152 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 Q8NAQ8 132 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 OR5H2Q8NGV7 314 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 ST8SIA2Q92186 375 aa17.63■□□□□ 0.41
FOXA1-204ENST00000554607 S100A16Q96FQ6 103 aaKnown RBP17.63■□□□□ 0.41
FOXA1-204ENST00000554607 PMP2P02689 132 aa17.62■□□□□ 0.41
FOXA1-204ENST00000554607 NPBWR1P48145 328 aa17.62■□□□□ 0.41
FOXA1-204ENST00000554607 ERHP84090 104 aaKnown RBP17.62■□□□□ 0.41
FOXA1-204ENST00000554607 OR6F1Q8NGZ6 308 aa17.62■□□□□ 0.41
FOXA1-204ENST00000554607 PINX1Q96BK5 328 aaKnown RBP17.62■□□□□ 0.41
FOXA1-204ENST00000554607 TMEM231Q9H6L2 316 aa17.62■□□□□ 0.41
FOXA1-204ENST00000554607 IGHV3-48P01763 117 aa17.61■□□□□ 0.41
FOXA1-204ENST00000554607 MIFP14174 115 aa17.61■□□□□ 0.41
FOXA1-204ENST00000554607 PRCDQ00LT1 54 aa17.61■□□□□ 0.41
FOXA1-204ENST00000554607 H2BFWTQ7Z2G1 175 aa17.61■□□□□ 0.41
FOXA1-204ENST00000554607 RNF167Q9H6Y7 350 aa17.61■□□□□ 0.41
FOXA1-204ENST00000554607 ANAPC10Q9UM13 185 aa17.61■□□□□ 0.41
FOXA1-204ENST00000554607 RYR1P21817 5038 aa17.6■□□□□ 0.41
FOXA1-204ENST00000554607 LOC100506127A0A0U1RQW1 187 aa17.6■□□□□ 0.41
FOXA1-204ENST00000554607 LPCAT3Q6P1A2 487 aa17.6■□□□□ 0.41
FOXA1-204ENST00000554607 MORN3Q6PF18 240 aaPredicted RBP17.6■□□□□ 0.41
FOXA1-204ENST00000554607 ZNF600Q6ZNG1 722 aa17.6■□□□□ 0.41
FOXA1-204ENST00000554607 LILRB2Q8N423 598 aa17.6■□□□□ 0.41
FOXA1-204ENST00000554607 TRAV10A0A0B4J240 114 aa17.59■□□□□ 0.41
FOXA1-204ENST00000554607 APOHP02749 345 aaPredicted RBP17.59■□□□□ 0.41
FOXA1-204ENST00000554607 NAT1P18440 290 aa17.59■□□□□ 0.41
FOXA1-204ENST00000554607 HLA-DMBP28068 263 aa17.59■□□□□ 0.41
FOXA1-204ENST00000554607 HSPE1P61604 102 aaKnown RBP17.59■□□□□ 0.41
FOXA1-204ENST00000554607 SEC22AQ96IW7 307 aa17.59■□□□□ 0.41
FOXA1-204ENST00000554607 FXYD6Q9H0Q3 95 aa17.59■□□□□ 0.41
FOXA1-204ENST00000554607 RABAC1Q9UI14 185 aa17.59■□□□□ 0.41
FOXA1-204ENST00000554607 IGHV4-28A0A0C4DH34 117 aa17.58■□□□□ 0.4
FOXA1-204ENST00000554607 A0A1W2PS18 150 aa17.58■□□□□ 0.4
FOXA1-204ENST00000554607 RBMY1A1P0DJD3 496 aaKnown RBP17.58■□□□□ 0.4
FOXA1-204ENST00000554607 RBMY1CP0DJD4 496 aa17.58■□□□□ 0.4
FOXA1-204ENST00000554607 SPP1P10451 314 aa17.58■□□□□ 0.4
FOXA1-204ENST00000554607 RBMY1FQ15415 496 aaKnown RBP17.58■□□□□ 0.4
FOXA1-204ENST00000554607 PHLDA2Q53GA4 152 aa17.58■□□□□ 0.4
FOXA1-204ENST00000554607 YTHDF1Q9BYJ9 559 aaKnown RBP17.58■□□□□ 0.4
FOXA1-204ENST00000554607 PUS1Q9Y606 427 aaKnown RBP eCLIP17.58■□□□□ 0.4
FOXA1-204ENST00000554607 IGHV4-4A0A075B6R2 117 aa17.57■□□□□ 0.4
FOXA1-204ENST00000554607 IGHV3-66A0A0C4DH42 116 aa17.57■□□□□ 0.4
FOXA1-204ENST00000554607 TMEM69Q5SWH9 247 aa17.57■□□□□ 0.4
FOXA1-204ENST00000554607 TRPT1Q86TN4 253 aaKnown RBP17.57■□□□□ 0.4
FOXA1-204ENST00000554607 CROCCP3Q8IVE0 287 aa17.57■□□□□ 0.4
FOXA1-204ENST00000554607 FAM24BQ8N5W8 94 aa17.57■□□□□ 0.4
FOXA1-204ENST00000554607 ZFAND3Q9H8U3 227 aa17.57■□□□□ 0.4
FOXA1-204ENST00000554607 NPPCP23582 126 aa17.56■□□□□ 0.4
FOXA1-204ENST00000554607 TBC1D26Q86UD7 250 aa17.56■□□□□ 0.4
FOXA1-204ENST00000554607 ZNF705EA8MWA4 302 aaPredicted RBP17.55■□□□□ 0.4
FOXA1-204ENST00000554607 TMEM50AO95807 157 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 GIG44P09565 113 aaPredicted RBP17.55■□□□□ 0.4
FOXA1-204ENST00000554607 SNCAP37840 140 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 TSPAN5P62079 268 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 UBE2NLQ5JXB2 153 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 PVRIGQ6DKI7 326 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 Q6ZTC4 211 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 GRAMD2BQ96HH9 432 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 RNF126Q9BV68 326 aa17.55■□□□□ 0.4
FOXA1-204ENST00000554607 PRSS3P35030 304 aa17.54■□□□□ 0.4
FOXA1-204ENST00000554607 HRH1P35367 487 aa17.54■□□□□ 0.4
FOXA1-204ENST00000554607 TAS2R20P59543 309 aa17.54■□□□□ 0.4
FOXA1-204ENST00000554607 LYSMD2Q8IV50 215 aa17.54■□□□□ 0.4
FOXA1-204ENST00000554607 K7EQG2 157 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 CORTO00230 105 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 IGKV1-39P01597 117 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 IGKV1D-39P04432 117 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 STXBP6Q8NFX7 210 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 MRGPRFQ96AM1 343 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 METTL26Q96S19 204 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 FAT2Q9NYQ8 4349 aa17.53■□□□□ 0.4
FOXA1-204ENST00000554607 A0A1B0GU03 582 aa17.52■□□□□ 0.4
FOXA1-204ENST00000554607 SCGB2A1O75556 95 aa17.52■□□□□ 0.4
FOXA1-204ENST00000554607 MED14OSP0DP75 135 aa17.52■□□□□ 0.4
FOXA1-204ENST00000554607 HLA-DMAP28067 261 aa17.52■□□□□ 0.4
FOXA1-204ENST00000554607 SUB1P53999 127 aaKnown RBP eCLIP17.52■□□□□ 0.4
FOXA1-204ENST00000554607 NARS2Q96I59 477 aaKnown RBP17.52■□□□□ 0.4
FOXA1-204ENST00000554607 TBC1D24Q9ULP9 559 aa17.52■□□□□ 0.4
FOXA1-204ENST00000554607 X6R8D5 127 aa17.52■□□□□ 0.4
FOXA1-204ENST00000554607 DNAH17Q9UFH2 4485 aa17.51■□□□□ 0.39
FOXA1-204ENST00000554607 ELOA3CA0A087WX78 387 aaPredicted RBP17.51■□□□□ 0.39
FOXA1-204ENST00000554607 INS-IGF2F8WCM5 200 aa17.51■□□□□ 0.39
FOXA1-204ENST00000554607 UCP3P55916 312 aa17.51■□□□□ 0.39
FOXA1-204ENST00000554607 Q9H521 79 aa17.51■□□□□ 0.39
FOXA1-204ENST00000554607 AGRNO00468 2067 aa17.51■□□□□ 0.39
FOXA1-204ENST00000554607 A0A1B0GVY2 172 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms