RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 IGHV3-23P01764 117 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 REG1AP05451 166 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 SERPINE2P07093 398 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 ANXA3P12429 323 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 EDN2P20800 178 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 PIGPP57054 158 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 ASAH1Q13510 395 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM128Q5BJH2 165 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 PLET1Q6UQ28 207 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 UNQ9165/PRO28630Q6UXU0 137 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 TBC1D26Q86UD7 250 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 FAM219AQ8IW50 185 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 OR52B4Q8NGK2 314 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 OR1L6Q8NGR2 347 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 OR13C8Q8NGS7 320 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 OR5B3Q8NH48 314 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 MARCH1Q8TCQ1 289 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 CACNG8Q8WXS5 425 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM190Q8WZ59 177 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 IL22RA2Q969J5 263 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
SLIRP-203ENST00000554074 BSCL2Q96G97 398 aaPredicted RBP4.95□□□□□ -1.62
SLIRP-203ENST00000554074 TSC22D3Q99576 134 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 SPAG8Q99932 426 aaPredicted RBP4.95□□□□□ -1.62
SLIRP-203ENST00000554074 FAM110AQ9BQ89 295 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 GGTLC1Q9BX51 225 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 WFDC10AQ9H1F0 79 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 C5orf66Q9H5L9 145 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 NDUFA4L2Q9NRX3 87 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 FKBP11Q9NYL4 201 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 PRNDQ9UKY0 176 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 F11RQ9Y624 299 aaKnown RBP4.95□□□□□ -1.62
SLIRP-203ENST00000554074 S4R3C0 116 aa4.95□□□□□ -1.62
SLIRP-203ENST00000554074 LOC102724200A0A096LPH7 203 aaPredicted RBP4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TEX13DA0A0J9YY54 714 aaPredicted RBP4.94□□□□□ -1.62
SLIRP-203ENST00000554074 C3orf85A0A1B0GTC6 90 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 DUXBA0A1W2PPF3 345 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 CRYM-AS1A6NIL9 109 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 K7EMT4 169 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 NDUFA4O00483 81 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TGOLN2O43493 480 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 SNAPC5O75971 98 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 RLN1P04808 185 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 OR13C7P0DN81 318 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 UCP1P25874 307 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 GPR183P32249 361 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 WT1-ASQ06250 92 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 ZNF585BQ52M93 769 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 PHLDA2Q53GA4 152 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TM4SF20Q53R12 229 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 BTNL8Q6UX41 500 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 RBPMS2Q6ZRY4 209 aaKnown RBP4.94□□□□□ -1.62
SLIRP-203ENST00000554074 WFDC3Q8IUB2 231 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 OR2C3Q8N628 320 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 OR10W1Q8NGF6 305 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 MRGPRFQ96AM1 343 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM56Q96MV1 263 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 RTBDNQ9BSG5 229 aaPredicted RBP4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM222Q9H0R3 208 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 NAA60Q9H7X0 242 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 RETNQ9HD89 108 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 DAZ1Q9NQZ3 744 aaKnown RBP4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM14BQ9NUH8 114 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 TP53TG1Q9Y2A0 90 aa4.94□□□□□ -1.62
SLIRP-203ENST00000554074 FAM240BA0A1B0GVZ2 78 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 C15orf61A6NNL5 157 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 C15orf62A8K5M9 175 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 F8W735 103 aaPredicted RBP4.93□□□□□ -1.62
SLIRP-203ENST00000554074 K7EIM0 57 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 TSPAN4O14817 238 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 PLA2G10O15496 165 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 JTBO76095 146 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 SCAF4O95104 1147 aaKnown RBP4.93□□□□□ -1.62
SLIRP-203ENST00000554074 CDS2O95674 445 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 KRASP01116 189 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 ATF4P18848 351 aaPredicted RBP4.93□□□□□ -1.62
SLIRP-203ENST00000554074 FCGR2BP31994 310 aaPredicted RBP4.93□□□□□ -1.62
SLIRP-203ENST00000554074 G6PCP35575 357 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 LPAR6P43657 344 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 MFAP2P55001 183 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 SLC25A24Q6NUK1 477 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 FAAP20Q6NZ36 180 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 Q6ZWC4 215 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 CENPSQ8N2Z9 138 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 LRTM2Q8N967 370 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 ZNF114Q8NC26 417 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 DUSP18Q8NEJ0 188 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 OR1P1Q8NH06 330 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 SCARB1Q8WTV0 552 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 RBPMSQ93062 196 aaKnown RBP4.93□□□□□ -1.62
SLIRP-203ENST00000554074 C21orf62Q9NYP8 219 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 OR51B2Q9Y5P1 312 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM56-RWDD3S4R434 201 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 STARD9Q9P2P6 4700 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
SLIRP-203ENST00000554074 AGRNO00468 2067 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 A0A0B4J2A0 478 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 KIR2DL5BA0A0G2JN68 375 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 KIR2DL5BA0A0G2JPC4 375 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 OR2T8A6NH00 312 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms