RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZNF471Q9BX82 626 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-208ENST00000553868 SLA2Q9H6Q3 261 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 FBXL17Q9UF56 701 aa11.43□□□□□ -0.58
SHMT2-208ENST00000553868 A0A1B0GUS0 222 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 FCN1O00602 326 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 JTBO76095 146 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 IFNA4P05014 189 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 NHLH2Q02577 135 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 Q6YL49 198 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 LILRB2Q8N423 598 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 OR4F5Q8NH21 305 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 ABHD5Q8WTS1 349 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 SSMEM1Q8WWF3 244 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 ARPC1AQ92747 370 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 PRDM13Q9H4Q3 707 aa11.42□□□□□ -0.58
SHMT2-208ENST00000553868 C15orf62A8K5M9 175 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 CYB5BO43169 146 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 OR13C7P0DN81 318 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 TPT1P13693 172 aaKnown RBP11.41□□□□□ -0.58
SHMT2-208ENST00000553868 IER3P46695 156 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 CX3CL1P78423 397 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 SLC38A11Q08AI6 406 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 C2orf83Q53S99 150 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 OR8G2PQ6IF36 304 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 ETV3LQ6ZN32 361 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 REC114Q7Z4M0 266 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 TMEM217Q8N7C4 229 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 OR10W1Q8NGF6 305 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 OR1L6Q8NGR2 347 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 ATP5SQ99766 215 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 GGACTQ9BVM4 153 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 SMIM3Q9BZL3 60 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 NOTCH3Q9UM47 2321 aa11.41□□□□□ -0.58
SHMT2-208ENST00000553868 IGLC7A0M8Q6 106 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 CLPSL1A2RUU4 121 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 CGB1A6NKQ9 187 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 HOXA3O43365 443 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-208ENST00000553868 IFNA5P01569 189 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 LY6EQ16553 131 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 BSXQ3C1V8 233 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 EIF5AL1Q6IS14 154 aaKnown RBP11.4□□□□□ -0.58
SHMT2-208ENST00000553868 TMEM219Q86XT9 240 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 ZNF114Q8NC26 417 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 TENM2Q9NT68 2774 aa11.4□□□□□ -0.58
SHMT2-208ENST00000553868 IGHV7-81A0A0B4J1V7 117 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 TEX22C9J3V5 150 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 E7EUB6 86 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 CORTO00230 105 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 IFNA7P01567 189 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 IGHV4-59P01825 116 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
SHMT2-208ENST00000553868 SSBP2P81877 361 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-208ENST00000553868 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 CLINT1Q14677 625 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 SLC25A24Q6NUK1 477 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 TMEM86BQ8N661 226 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 UBAC2Q8NBM4 344 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
SHMT2-208ENST00000553868 TMEM68Q96MH6 324 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
SHMT2-208ENST00000553868 A0A1B0GW64 132 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 PMS2P5A8MQ11 134 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 DLK1P80370 383 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 RPL7L1Q6DKI1 246 aaKnown RBP11.38□□□□□ -0.59
SHMT2-208ENST00000553868 BAP18Q8IXM2 172 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 OR1P1Q8NH06 330 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 SCGB1C1Q8TD33 95 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 ST8SIA2Q92186 375 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 PHYHIPLQ96FC7 376 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 BSCL2Q96G97 398 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-208ENST00000553868 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 UQCC1Q9NVA1 299 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 AURKAIP1Q9NWT8 199 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-208ENST00000553868 RNF114Q9Y508 228 aa11.38□□□□□ -0.59
SHMT2-208ENST00000553868 RPS10-NUDT3A0A1W2PQS6 291 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 NPIPB5A8MRT5 1133 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 FNDC10F2Z333 226 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 CRYBA1P05813 215 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 AREGP15514 252 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 ARL16Q0P5N6 197 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 ETFRF1Q6IPR1 90 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 ZNF767PQ75MW2 155 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 HAPLN4Q86UW8 402 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 CACNG8Q8WXS5 425 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 WWC2-AS2Q96NR7 200 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 P2RX4Q99571 388 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-208ENST00000553868 PARP11Q9NR21 331 aa11.37□□□□□ -0.59
SHMT2-208ENST00000553868 F11RQ9Y624 299 aaKnown RBP11.37□□□□□ -0.59
SHMT2-208ENST00000553868 DNAH1Q9P2D7 4330 aa11.36□□□□□ -0.59
SHMT2-208ENST00000553868 DEFA4P12838 97 aa11.36□□□□□ -0.59
SHMT2-208ENST00000553868 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-208ENST00000553868 EXOSC2Q13868 293 aaKnown RBP11.36□□□□□ -0.59
SHMT2-208ENST00000553868 GNPNAT1Q96EK6 184 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-208ENST00000553868 HSPB9Q9BQS6 159 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms