RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 DOPEY1Q5JWR5 2465 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 SEC14L6B5MCN3 397 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 CLEC7AQ9BXN2 247 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 RNASE7Q9H1E1 156 aaKnown RBP8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 GOSR1O95249 250 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 MSMPQ1L6U9 139 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 LINC00305Q7Z4B0 112 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 SLC25A33Q9BSK2 321 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 KIAA1549Q9HCM3 1950 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 K7EQM0 130 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 TIMM23O14925 209 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 IGKV1-39P01597 117 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 IGKV1D-39P04432 117 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 REG4Q9BYZ8 158 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 SEPSECSQ9HD40 501 aaKnown RBP8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 PAM16Q9Y3D7 125 aa8.89□□□□□ -0.99
TGFBR1-209ENST00000552516 ZNF146Q15072 292 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 NRN1LQ496H8 165 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 GFI1BQ5VTD9 330 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 GLRX5Q86SX6 157 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 RPP25LQ8N5L8 163 aaKnown RBP8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 DIRC2Q96SL1 478 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 AAMDCQ9H7C9 122 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 AP4M1O00189 453 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 CXorf1O96002 111 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 KHDC3LQ587J8 217 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 SMIM8Q96KF7 97 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 DMDP11532 3685 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 PKD1L2Q7Z442 2459 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 FCER1GP30273 86 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 COLCA1Q6ZS62 124 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 ZNF383Q8NA42 475 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 PLSCR2Q9NRY7 297 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 DKK4Q9UBT3 224 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 OR2T8A6NH00 312 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 ZNF729A6NN14 1252 aaPredicted RBP8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 KIR2DS2P43631 304 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 NMSQ5H8A3 153 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 RNF2Q99496 336 aa8.88□□□□□ -0.99
TGFBR1-209ENST00000552516 B9A039 149 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 USF1P22415 310 aaPredicted RBP8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 PPOXP50336 477 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 GLMPQ8WWB7 406 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 LSM10Q969L4 123 aaKnown RBP8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 PGLYRP4Q96LB8 373 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 HYPMO75409 117 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 SRP19P09132 144 aaKnown RBP8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 GPR183P32249 361 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 SERF2P84101 59 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 IGHG3P01860 377 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 CLEC2AQ6UVW9 174 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 C1QL4Q86Z23 238 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 RBFOX2O43251 390 aaKnown RBP eCLIP8.87□□□□□ -0.992e-8■■□□□ 13.1
TGFBR1-209ENST00000552516 LIPFP07098 398 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 FABP1P07148 127 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 TRGC1P0CF51 173 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 CRISP2P16562 243 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 SRP14P37108 136 aaKnown RBP8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 MEOX2P50222 304 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 FOXL2NBQ6ZUU3 175 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 ZNF596Q8TC21 504 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 VN1R17PQ8TDU5 208 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 Q8WTZ3 238 aa8.87□□□□□ -0.99
TGFBR1-209ENST00000552516 DUXBA0A1W2PPF3 345 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 IFNL4K9M1U5 179 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 ZZEF1O43149 2961 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 PPIFP30405 207 aaKnown RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 SCGB2A2Q13296 93 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 ICAM4Q14773 271 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 ZNF430Q9H8G1 570 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 ST6GALNAC3Q8NDV1 305 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 C1orf162Q8NEQ5 155 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 ARPC4-TTLL3A0A0A6YYG9 625 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 UCNP55089 124 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 RPEL1Q2QD12 228 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 GP6Q9HCN6 339 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 IGHV3OR16-12A0A075B7B8 117 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 MBD3L4A6NDZ8 208 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 MBD3L3A6NE82 208 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 MBD3L5A6NJ08 208 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 F5H697 171 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 AREGP15514 252 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 PIP4P1Q86T03 277 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 CLDND2Q8NHS1 167 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 MBD3L2Q8NHZ7 208 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 SSBP4Q9BWG4 385 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 DNAJC4Q9NNZ3 241 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 HIST1H1BP16401 226 aaKnown RBP8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 GCHFRP30047 84 aa8.86□□□□□ -0.99
TGFBR1-209ENST00000552516 PDLIM4P50479 330 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms