RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 TXN2Q99757 166 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 MS4A6AQ9H2W1 248 aa11.24□□□□□ -0.61
RAB5C-205ENST00000550013 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 GNG7O60262 68 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 DFFBO76075 338 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 NAT1P18440 290 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 TAS2R46P59540 309 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 TAS2R20P59543 309 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 PAFAH1B2P68402 229 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 TMEM187Q14656 261 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 ZNF114Q8NC26 417 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
RAB5C-205ENST00000550013 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
RAB5C-205ENST00000550013 IGLL5B9A064 214 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-205ENST00000550013 EIF4EP06730 217 aaKnown RBP11.22□□□□□ -0.61
RAB5C-205ENST00000550013 HLA-DMAP28067 261 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 HRH1P35367 487 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 NEDD8Q15843 81 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 SPINK9Q5DT21 86 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 UBE2NLQ5JXB2 153 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 TMEM69Q5SWH9 247 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 TBC1D26Q86UD7 250 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 Q8NAQ8 132 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 OR6F1Q8NGZ6 308 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 GINS3Q9BRX5 216 aa11.22□□□□□ -0.61
RAB5C-205ENST00000550013 RPL11P62913 178 aaKnown RBP11.21□□□□□ -0.61
RAB5C-205ENST00000550013 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
RAB5C-205ENST00000550013 H2BFWTQ7Z2G1 175 aa11.21□□□□□ -0.61
RAB5C-205ENST00000550013 SAMD12Q8N8I0 201 aa11.21□□□□□ -0.61
RAB5C-205ENST00000550013 MRGPRFQ96AM1 343 aa11.21□□□□□ -0.61
RAB5C-205ENST00000550013 YTHDF1Q9BYJ9 559 aaKnown RBP11.21□□□□□ -0.61
RAB5C-205ENST00000550013 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
RAB5C-205ENST00000550013 PUS1Q9Y606 427 aaKnown RBP eCLIP11.21□□□□□ -0.61
RAB5C-205ENST00000550013 DNAH2Q9P225 4427 aa11.21□□□□□ -0.62
RAB5C-205ENST00000550013 RYR1P21817 5038 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 CD5P06127 495 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-205ENST00000550013 RBMY1A1P0DJD3 496 aaKnown RBP11.2□□□□□ -0.62
RAB5C-205ENST00000550013 RBMY1CP0DJD4 496 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 TCTAP57738 103 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
RAB5C-205ENST00000550013 RBMY1FQ15415 496 aaKnown RBP11.2□□□□□ -0.62
RAB5C-205ENST00000550013 STHQ8IWL8 128 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 FAM212BQ9NTI7 297 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-205ENST00000550013 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
RAB5C-205ENST00000550013 IGHV4-28A0A0C4DH34 117 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 A0A1B0GU03 582 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 TMEM127O75204 238 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 PRSS3P35030 304 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 TSPAN5P62079 268 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
RAB5C-205ENST00000550013 ZNF600Q6ZNG1 722 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 DUSP18Q8NEJ0 188 aa11.19□□□□□ -0.62
RAB5C-205ENST00000550013 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 S100GP29377 79 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 RPS19P39019 145 aaKnown RBP11.18□□□□□ -0.62
RAB5C-205ENST00000550013 NPBWR1P48145 328 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 LPCAT3Q6P1A2 487 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
RAB5C-205ENST00000550013 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 GPX8Q8TED1 209 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 HRH4Q9H3N8 390 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 Q9H521 79 aa11.18□□□□□ -0.62
RAB5C-205ENST00000550013 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
RAB5C-205ENST00000550013 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
RAB5C-205ENST00000550013 TMEM50AO95807 157 aa11.17□□□□□ -0.62
RAB5C-205ENST00000550013 C4BPBP20851 252 aa11.17□□□□□ -0.62
RAB5C-205ENST00000550013 Q6ZTC4 211 aa11.17□□□□□ -0.62
RAB5C-205ENST00000550013 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
RAB5C-205ENST00000550013 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
RAB5C-205ENST00000550013 DYNC1H1Q14204 4646 aaKnown RBP11.16□□□□□ -0.62
RAB5C-205ENST00000550013 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-205ENST00000550013 K7EQG2 157 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 ATP6V1G2O95670 118 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 NPPCP23582 126 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 SNCAP37840 140 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 PPP5CP53041 499 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
RAB5C-205ENST00000550013 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 X6R8D5 127 aa11.16□□□□□ -0.62
RAB5C-205ENST00000550013 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 A0A0B4J293 547 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 ZNF688P0C7X2 276 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 P0C879 139 aa11.15□□□□□ -0.62
RAB5C-205ENST00000550013 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms