RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CLINT1Q14677 625 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 SLC25A24Q6NUK1 477 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 C19orf35Q6ZS72 473 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 STPG2Q8N412 459 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 LILRB2Q8N423 598 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 OR5C1Q8NGR4 320 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 FAM110DQ8TAY7 271 aaPredicted RBP8.39□□□□□ -1.07
DDB1-221ENST00000543162 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
DDB1-221ENST00000543162 PINX1Q96BK5 328 aaKnown RBP8.39□□□□□ -1.07
DDB1-221ENST00000543162 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 ARPC5LQ9BPX5 153 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 LINC00527Q9UJ94 153 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 MAST4O15021 2626 aa8.39□□□□□ -1.07
DDB1-221ENST00000543162 TCF21O43680 179 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 DFFBO76075 338 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 PRH1P02810 166 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 MFAP2P55001 183 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 OPCMLQ14982 345 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 TMEM95Q3KNT9 176 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 PVRIGQ6DKI7 326 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 Q8N2B8 174 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 NOL4LQ96MY1 436 aaPredicted RBP8.38□□□□□ -1.07
DDB1-221ENST00000543162 ZNF355PQ9NSJ1 428 aa8.38□□□□□ -1.07
DDB1-221ENST00000543162 BORCS7-ASMTA0A0B4J1R7 106 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 RPS10-NUDT3A0A1W2PQS6 291 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 PRSS46E5RG02 174 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 TSPAN9O75954 239 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
DDB1-221ENST00000543162 OPRK1P41145 380 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 DLK1P80370 383 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 CD69Q07108 199 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 EXOSC2Q13868 293 aaKnown RBP8.37□□□□□ -1.07
DDB1-221ENST00000543162 OR2T6Q8NHC8 308 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 ATP5SQ99766 215 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 TMEM147Q9BVK8 224 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 GGACTQ9BVM4 153 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 ZNF471Q9BX82 626 aaPredicted RBP8.37□□□□□ -1.07
DDB1-221ENST00000543162 GON7Q9BXV9 100 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 WFDC1Q9HC57 220 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 UQCC1Q9NVA1 299 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 THYN1Q9P016 225 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 DMRT1Q9Y5R6 373 aa8.37□□□□□ -1.07
DDB1-221ENST00000543162 IGLV11-55A0A075B6I3 123 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 SMCO3A2RU48 225 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 SOX15O60248 233 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 IFNA5P01569 189 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 PPIFP30405 207 aaKnown RBP8.36□□□□□ -1.07
DDB1-221ENST00000543162 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
DDB1-221ENST00000543162 ZNF266Q14584 549 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
DDB1-221ENST00000543162 ETFRF1Q6IPR1 90 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 Q6ZSV7 163 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 SLC16A13Q7RTY0 426 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 CACNG8Q8WXS5 425 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 SLC35E1Q96K37 410 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 CYTL1Q9NRR1 136 aa8.36□□□□□ -1.07
DDB1-221ENST00000543162 UBE2L5PA0A1B0GUS4 154 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 FNDC10F2Z333 226 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 H3BUA1 57 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 OR2J3O76001 311 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 JTBO76095 146 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 MT-CO2P00403 227 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 EIF5AP63241 154 aaKnown RBP8.35□□□□□ -1.07
DDB1-221ENST00000543162 SLC35B1P78383 322 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 RHOGP84095 191 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 CFHR3Q02985 330 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 AKR1C1Q04828 323 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 MLANAQ16655 118 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 VWC2Q2TAL6 325 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 SLC51BQ86UW2 128 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 NECAP1Q8NC96 275 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 MS4A10Q96PG2 267 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 FNDC4Q9H6D8 234 aaPredicted RBP8.35□□□□□ -1.07
DDB1-221ENST00000543162 SERTAD4Q9NUC0 356 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 FBXL7Q9UJT9 491 aa8.35□□□□□ -1.07
DDB1-221ENST00000543162 TRBV9A0A0B4J1U6 114 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 IGHV3-21A0A0B4J1V1 117 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 PSMB11A5LHX3 300 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 I3L2K1 104 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 K7EIM0 57 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 NDUFB8O95169 186 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 BRI3O95415 125 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 IGHG4P01861 327 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 TRGV3P03979 118 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 PF4V1P10720 104 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 TPT1P13693 172 aaKnown RBP8.34□□□□□ -1.07
DDB1-221ENST00000543162 GAMTQ14353 236 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 KLK9Q2XQG4 91 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 CENPVQ7Z7K6 275 aaPredicted RBP8.34□□□□□ -1.07
DDB1-221ENST00000543162 ZNF329Q86UD4 541 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 UBAC2Q8NBM4 344 aa8.34□□□□□ -1.07
DDB1-221ENST00000543162 TAF15Q92804 592 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDB1-221ENST00000543162 ACY3Q96HD9 319 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms