RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 OR10W1Q8NGF6 305 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 OR4S2Q8NH73 311 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 TRIB1Q96RU8 372 aa11.38□□□□□ -0.59
SCNN1A-215ENST00000540037 SH2D7A6NKC9 451 aaPredicted RBP11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 CALYQ9NYX4 217 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 DMXL2Q8TDJ6 3036 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 M0QZ24 198 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 PYYP10082 97 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 PPOXP50336 477 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 MFAP2P55001 183 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
SCNN1A-215ENST00000540037 NAV3Q8IVL0 2385 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 J3QR06 171 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 CORTO00230 105 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 IGKV3-15P01624 115 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 CAMPP49913 170 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 STUMQ69YW2 141 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 CLCF1Q9UBD9 225 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 KALRNO60229 2985 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 IGLL1P15814 213 aa11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 INO80CQ6PI98 192 aaPredicted RBP11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 SLC25A10Q9UBX3 287 aaPredicted RBP11.36□□□□□ -0.59
SCNN1A-215ENST00000540037 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 MMP23AO75900 390 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 RBX1P62877 108 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 C17orf58Q2M2W7 97 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 OR2T6Q8NHC8 308 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 LNP1A1A4G5 178 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 IZUMO1RA6ND01 250 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 Q6ZT83 130 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 SNRNP40Q96DI7 357 aaKnown RBP11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 PLXNB1O43157 2135 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 M0R2Z0 102 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 HSBP1O75506 76 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 ACP1P24666 158 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 NUP35Q8NFH5 326 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 RND1Q92730 232 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 SLC25A33Q9BSK2 321 aa11.35□□□□□ -0.59
SCNN1A-215ENST00000540037 SRRM5B3KS81 715 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 F2RL2O00254 374 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 MGST3O14880 152 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 PLAUP00749 431 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 CEACAM8P31997 349 aaPredicted RBP11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 HES3Q5TGS1 186 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 MOGAT3Q86VF5 341 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 SLC25A2Q9BXI2 301 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 HOXC12P31275 282 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 SELENOVP59797 346 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 GNG5P63218 68 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 UBE2L3P68036 154 aaKnown RBP11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
SCNN1A-215ENST00000540037 LOC105371242A0A075B767 164 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 FAM167A-AS1Q96KT0 104 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 COX11Q9Y6N1 276 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 IGHV2OR16-5A0A0B4J2B6 119 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 E7EUB6 86 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 RPL19P84098 196 aaKnown RBP11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 VHLLQ6RSH7 139 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 KLHDC1Q8N7A1 406 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 DEFB108BQ8NET1 73 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 OR2V2Q96R30 315 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 NKX6-3A6NJ46 265 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 C8orf88P0DMB2 117 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
SCNN1A-215ENST00000540037 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 DSCAML1Q8TD84 2053 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 DYSFO75923 2080 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 UBE2V1Q13404 147 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
SCNN1A-215ENST00000540037 AMMECR1Q9Y4X0 333 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms