RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SDHAF2Q9NX18 166 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 BABAM2Q9NXR7 383 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 SCN3BQ9NY72 215 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 MTCH1Q9NZJ7 389 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 CCDC59Q9P031 241 aaKnown RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 GLS2Q9UI32 602 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 ZNF222Q9UK12 451 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 LSM2Q9Y333 95 aaKnown RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 TPRKBQ9Y3C4 175 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 TBL2Q9Y4P3 447 aaKnown RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 ANKRD17O75179 2603 aaKnown RBP2.5□□□□□ -2.01
CD44-219ENST00000525685 ABCA12Q86UK0 2595 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 PLCE1Q9P212 2302 aa2.5□□□□□ -2.01
CD44-219ENST00000525685 OTOGQ6ZRI0 2925 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 YLPM1P49750 1951 aaKnown RBP2.49□□□□□ -2.01
CD44-219ENST00000525685 IGKV1D-17A0A075B6S4 117 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 TRAV8-7A0A075B6U6 113 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 TRAV38-1A0A0B4J264 116 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 IGKV1-12A0A0C4DH73 117 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 C9orf170A2RU37 121 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 SERPINE3A8MV23 424 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 FAM25AB3EWG3 89 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 FAM25CB3EWG5 89 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 FAM25GB3EWG6 89 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 B4DSR2 109 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 TRAPPC2LH3BP13 241 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 GABRPO00591 440 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 PIN1P1O15428 100 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 ANGPTL7O43827 346 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 RAMP3O60896 148 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 FOXH1O75593 365 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 SC5DO75845 299 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 BRI3O95415 125 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 MOSP00540 346 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 IGKV1D-12P01611 117 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 GYPAP02724 150 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 ALDOBP05062 364 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 PGA5P0DJD9 388 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 MUC1P15941 1255 aaPredicted RBP2.49□□□□□ -2.01
CD44-219ENST00000525685 CELP19835 753 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 CFHR2P36980 270 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 TAS2R43P59537 309 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 RPS25P62851 125 aaKnown RBP2.49□□□□□ -2.01
CD44-219ENST00000525685 LCN2P80188 198 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 MLLT11Q13015 90 aaPredicted RBP2.49□□□□□ -2.01
CD44-219ENST00000525685 INSL4Q14641 139 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 DGUOKQ16854 277 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 BSXQ3C1V8 233 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 Q499Y3 187 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 AKIRIN2Q53H80 203 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 SLC25A26Q70HW3 274 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 ANGPTL5Q86XS5 388 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 DUSP18Q8NEJ0 188 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 OR8B3Q8NGG8 313 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 OR5D13Q8NGL4 314 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 GHSRQ92847 366 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 TMEM106AQ96A25 262 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 C12orf43Q96C57 262 aaKnown RBP2.49□□□□□ -2.01
CD44-219ENST00000525685 DERL3Q96Q80 235 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 SPACA5Q96QH8 159 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 OR8B2Q96RD0 313 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 CCL13Q99616 98 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 Q9H521 79 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 ACOT13Q9NPJ3 140 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 RBFOX1Q9NWB1 397 aaKnown RBP2.49□□□□□ -2.01
CD44-219ENST00000525685 KAAG1Q9UBP8 84 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 CLN8Q9UBY8 286 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 OR5V1Q9UGF6 321 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 OPN4Q9UHM6 478 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 SMPXQ9UHP9 88 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 SLC7A11Q9UPY5 501 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 GOLT1BQ9Y3E0 138 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 INSIG2Q9Y5U4 225 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 ABCA2Q9BZC7 2435 aa2.49□□□□□ -2.01
CD44-219ENST00000525685 VPS13CQ709C8 3753 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 POLQO75417 2590 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 TRAV40A0A0B4J280 105 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 A0A0G2JMP0 313 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 A0A0X1KG70 313 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 A0A1B0GW15 77 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 J3QLI3 93 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 HSD17B6O14756 317 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 NBR2O15453 112 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ARPC5O15511 151 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 NDUFB3O43676 98 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ENSAO43768 121 aaKnown RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 MRPS14O60783 128 aaKnown RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 ZNF737O75373 536 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 HAND1O96004 215 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 MAS1P04201 325 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 CD2P06729 351 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 UCHL1P09936 223 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 IGFBP3P17936 291 aaPredicted RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 ERP29P30040 261 aaKnown RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 CEACAM6P40199 344 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 GABRA2P47869 451 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 NPBWR2P48146 333 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 NMUP48645 174 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 RBP2P50120 134 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 NUTF2P61970 127 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms