RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 PGA5P0DJD9 388 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 FAM236CP0DP71 79 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 PSMB9P28065 219 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 HINT1P49773 126 aaPredicted RBP2.52□□□□□ -2.01
CD44-217ENST00000525348 SSR4P51571 173 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 GPM6AP51674 278 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 HNRNPA3P51991 378 aaKnown RBP2.52□□□□□ -2.01
CD44-217ENST00000525348 EMP1P54849 157 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CRADDP78560 199 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SLC38A11Q08AI6 406 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 FOXF1Q12946 379 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CATR1Q13166 79 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 DIAPH2-AS1Q14236 149 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ELOBQ15370 118 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ZNF141Q15928 474 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 TMEM183BQ1AE95 376 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR2T5Q6IEZ7 315 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 C1orf158Q8N1D5 194 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ZCCHC24Q8N2G6 241 aaKnown RBP2.52□□□□□ -2.01
CD44-217ENST00000525348 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 KRTCAP2Q8N6L1 136 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR8B12Q8NGG6 310 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR5A1Q8NGJ0 315 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR51G1Q8NGK1 321 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR1J4Q8NGS1 313 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR2T29Q8NH02 315 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SLC25A40Q8TBP6 338 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ZNF675Q8TD23 568 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SLC37A2Q8TED4 501 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 RXFP2Q8WXD0 754 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 RDH5Q92781 318 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SLC25A46Q96AG3 418 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SDSLQ96GA7 329 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CARD19Q96LW7 228 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 PEBP4Q96S96 227 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 GPER1Q99527 375 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 MCHR1Q99705 422 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 NIPSNAP3BQ9BS92 247 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 VAMP8Q9BV40 100 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 OR2D2Q9H210 308 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 Q9H3A6 140 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ACER3Q9NUN7 267 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 CLCF1Q9UBD9 225 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 LSM7Q9UK45 103 aaKnown RBP2.52□□□□□ -2.01
CD44-217ENST00000525348 LSM5Q9Y4Y9 91 aaKnown RBP2.52□□□□□ -2.01
CD44-217ENST00000525348 ORC6Q9Y5N6 252 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 IER3IP1Q9Y5U9 82 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 SCN1AP35498 2009 aa2.52□□□□□ -2.01
CD44-217ENST00000525348 ZNF816-ZNF321PA0A0X1KG74 233 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 CD300LBA8K4G0 201 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 ZNF705FA8MVS1 300 aaPredicted RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 LY6LH3BQJ8 138 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 PIRO00625 290 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 GEMIN2O14893 280 aaKnown RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 UBL3O95164 117 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 SFT2D2O95562 160 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 MT-ATP8P03928 68 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 HLA-DQB2P05538 268 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 SCTP09683 121 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 IGLC6P0CF74 106 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 ZNF705DP0CH99 300 aaPredicted RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 ZNF705BP0CI00 300 aaPredicted RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 CTSEP14091 401 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 TSPOP30536 169 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 SNCAP37840 140 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 MAGEA5P43359 124 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 MRPS6P82932 125 aaKnown RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 ZNF92Q03936 586 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 KLRD1Q13241 179 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 ENDOGQ14249 297 aaKnown RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 GGTLC2Q14390 218 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 ACSF3Q4G176 576 aaPredicted RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 RASL11AQ6T310 242 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 TMEM91Q6ZNR0 172 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 FAM231DQ6ZW35 169 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 OOSP2Q86WS3 158 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 TMEM86AQ8N2M4 240 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 KCNRGQ8N5I3 272 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 NPWQ8N729 165 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 COX18Q8N8Q8 333 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 Q8N976 141 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 WDR31Q8NA23 367 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 TMEM229BQ8NBD8 167 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 OR4B1Q8NGF8 309 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 OR51A2Q8NGJ7 313 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 OR5AR1Q8NGP9 310 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 OR5AK2Q8NH90 309 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 SLAMF6Q96DU3 332 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 ACY3Q96HD9 319 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 BMFQ96LC9 184 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 IMMP2LQ96T52 175 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 PRADC1Q9BSG0 188 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 RTBDNQ9BSG5 229 aaPredicted RBP2.51□□□□□ -2.01
CD44-217ENST00000525348 SFXN3Q9BWM7 321 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 SAMD10Q9BYL1 202 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 DPY30Q9C005 99 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 OR51E2Q9H255 320 aa2.51□□□□□ -2.01
CD44-217ENST00000525348 EDA2RQ9HAV5 297 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms