RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 M0R1X1 148 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 HSD17B6O14756 317 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PHOX2AO14813 284 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PGLYRP1O75594 196 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 IGKV1D-33P01593 117 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 IGKV1-33P01594 117 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CD3DP04234 171 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CRYBA1P05813 215 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 SAA2P0DJI9 122 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 RRASP10301 218 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 IL7P13232 177 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PGAM2P15259 253 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PAX6P26367 422 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 S100GP29377 79 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CD40LGP29965 261 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 GNRHRP30968 328 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 FAUP35544 74 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 REG1BP48304 166 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 INPP1P49441 399 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CNN1P51911 297 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 FXYD4P59646 89 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 UBA52P62987 128 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 EIF4EBP1Q13541 118 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 RPL39P5Q59GN2 51 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 MUC21Q5SSG8 566 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 AADACL3Q5VUY0 350 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 C16orf87Q6PH81 154 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CCBE1Q6UXH8 406 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 LHFPL1Q86WI0 220 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 SLC38A6Q8IZM9 456 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 TOMM5Q8N4H5 51 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 Q8N6K4 173 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF645Q8N7E2 425 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 DRAXINQ8NBI3 349 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 OR51S1Q8NGJ8 323 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 OR4C16Q8NGL9 310 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 OR2T10Q8NGZ9 312 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 OR56B4Q8NH76 319 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 TERB2Q8NHR7 220 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 ZFAND1Q8TCF1 268 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PCNPQ8WW12 178 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 DEDD2Q8WXF8 326 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF414Q96IQ9 312 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CXorf58Q96LI9 332 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 RBM14Q96PK6 669 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 SCGB3A2Q96PL1 93 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 HSD17B10Q99714 261 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 RNF5Q99942 180 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PRRT1Q99946 306 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 C7orf50Q9BRJ6 194 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 MRPL20Q9BYC9 149 aaKnown RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 OCR1Q9BZK8 76 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CHIAQ9BZP6 476 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 OR2D2Q9H210 308 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 FNDC4Q9H6D8 234 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PLEKHA3Q9HB20 300 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 HRASLSQ9HDD0 168 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 ESM1Q9NQ30 184 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 CCL28Q9NRJ3 127 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 TNFRSF19Q9NS68 423 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 SLC2A8Q9NY64 477 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 SCP2D1Q9UJQ7 156 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 PITPNC1Q9UKF7 332 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 VPREB3Q9UKI3 123 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 APCP25054 2843 aa2.42□□□□□ -2.02
VPS13B-209ENST00000521559 LINC00854A0A1B0GVQ3 168 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CENPXA8MT69 81 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RNF212BA8MTL3 300 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 H7C2Y5 167 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 M0QZK8 103 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 GPR31O00270 319 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CHEK1O14757 476 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 PLA2G10O15496 165 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RBFOX2O43251 390 aaKnown RBP eCLIP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CHST1O43916 411 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 UPK1BO75841 260 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 OR2F2O95006 317 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 NDUFA7O95182 113 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 MOSP00540 346 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 APOA2P02652 100 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CTSDP07339 412 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CD24P25063 80 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 KIR2DS2P43631 304 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 LGALS7P47929 136 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 FHITP49789 147 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 NDUFV3P56181 108 aaKnown RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RIPPLY3P57055 190 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RND3P61587 244 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RPL30P62888 115 aaKnown RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 HERV-K104P63124 156 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 HES1Q14469 280 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 SURF2Q15527 256 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 LY6EQ16553 131 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RTL8BQ17RB0 113 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 SCGB2B2Q4G0G5 96 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 ABCA11PQ4W5N1 156 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 TRIQKQ629K1 86 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF57Q68EA5 555 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms