RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 IFNA5P01569 189 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 MAS1P04201 325 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 CD7P09564 240 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 FAUP35544 74 aaKnown RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 KIR2DS2P43631 304 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 CNN1P51911 297 aaKnown RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 SSBP2P81877 361 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 IL13RA2Q14627 380 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 RBMS2Q15434 407 aaKnown RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 CD300EQ496F6 205 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM69Q5SWH9 247 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 RNASEKQ6P5S7 137 aaKnown RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 HSD17B11Q8NBQ5 300 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 OR6M1Q8NGM8 313 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 OR6F1Q8NGZ6 308 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 RFESDQ8TAC1 157 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 RAB24Q969Q5 203 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 FAM3DQ96BQ1 224 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 FGGYQ96C11 551 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 SLC25A38Q96DW6 304 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF486Q96H40 463 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 USMG5Q96IX5 58 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 NICN1Q9BSH3 213 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF430Q9H8G1 570 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 SLC2A9Q9NRM0 540 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 SPANXA1Q9NS26 97 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF221Q9UK13 617 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 RAB22AQ9UL26 194 aa3.65□□□□□ -1.83
SDCBP-207ENST00000520168 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.83
SDCBP-207ENST00000520168 TRAV8-7A0A075B6U6 113 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TRAV26-1A0A087WT03 109 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TRAV24A0A0B4J272 114 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 KIR2DL5BA0A0G2JN68 375 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 KIR2DL5BA0A0G2JPC4 375 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 LOC107986453A0A1B0GWG9 222 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ANKRD20A5PA0PJZ0 165 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM30CPA0ZSE6 113 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 METTL21EPA6NDL7 271 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF785A8K8V0 405 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 SMLR1H3BR10 107 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 C15orf65H3BRN8 121 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 HSPB6O14558 160 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 RAB29O14966 203 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 SPINT2O43291 252 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PRAF2O60831 178 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TCRBP04435 133 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 HTR2CP28335 458 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PRSS3P35030 304 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 GPX4P36969 197 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PPT1P50897 306 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TIRAPP58753 221 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TAS2R20P59543 309 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 RAB2AP61019 212 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 CX3CL1P78423 397 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 RPL19P84098 196 aaKnown RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 NDPQ00604 133 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 EWSR1Q01844 656 aaKnown RBP eCLIP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 NHLH2Q02577 135 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 RAB31Q13636 194 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 KLF9Q13886 244 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PLGLAQ15195 96 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 GUCA2BQ16661 112 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZFP69Q49AA0 526 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 RNASE10Q5GAN6 216 aaKnown RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 SOHLH1Q5JUK2 328 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 C1orf100Q5SVJ3 147 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 DNLZQ5SXM8 178 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 FAM71F2Q6NXP2 309 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF343Q6P1L6 599 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF529Q6P280 563 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF767PQ75MW2 155 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 MRPL52Q86TS9 123 aaKnown RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 LINC00596Q86U02 117 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PPP1R27Q86WC6 154 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TCTE3Q8IZS6 198 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 KIR2DL5AQ8N109 375 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 Q8N1X5 172 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF439Q8NDP4 499 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 LFNGQ8NES3 379 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PXT1Q8NFP0 134 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 OR51A4Q8NGJ6 313 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 OR10AC1Q8NH08 325 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 OR52I2Q8NH67 350 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 KIR2DL5BQ8NHK3 375 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 MARCH1Q8TCQ1 289 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 CASTOR1Q8WTX7 329 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 SNAPC3Q92966 411 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ARL11Q969Q4 196 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 PINX1Q96BK5 328 aaKnown RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ST6GAL2Q96JF0 529 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 MS4A10Q96PG2 267 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 RNF5Q99942 180 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 SRSF8Q9BRL6 282 aaKnown RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 CSTL1Q9H114 145 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 WFDC10AQ9H1F0 79 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms