RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 RPL8P62917 257 aaKnown RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 PLA2G7Q13093 441 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 GNMTQ14749 295 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ZNF79Q15937 498 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 C9orf66Q5T8R8 295 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 SPATA31B1PQ5VZV4 182 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR8G2PQ6IF36 304 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 OR10K2Q6IF99 312 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 TMEM88Q6PEY1 159 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 C1QL4Q86Z23 238 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 SGPP2Q8IWX5 399 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 RBPMSQ93062 196 aaKnown RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 ORAI1Q96D31 301 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 ZNF2Q9BSG1 426 aaPredicted RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 RTBDNQ9BSG5 229 aaPredicted RBP2.2□□□□□ -2.06
MCF2-208ENST00000519895 MCUBQ9NWR8 336 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 U3KQ87 197 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 AKAP6Q13023 2319 aa2.2□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1D-8A0A087WSZ0 117 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C3orf85A0A1B0GTC6 90 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 NDUFB8O95169 186 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 PTTG1O95997 202 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 AREGP15514 252 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 ANXA7P20073 488 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 NFYBP25208 207 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 RPL27AP46776 148 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 PLP1P60201 277 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 YPEL3P61236 119 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 SSBP2P81877 361 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 CYCSP99999 105 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 VWC2Q2TAL6 325 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 DMRTC1Q5HYR2 192 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 PLET1Q6UQ28 207 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 FAM131AQ6UXB0 335 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 ZNF818PQ6ZRF7 136 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TOMM5Q8N4H5 51 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 KLHDC1Q8N7A1 406 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 LINC00482Q8N8I6 264 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C19orf18Q8NEA5 215 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR1S2Q8NGQ3 325 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR13C8Q8NGS7 320 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR56B4Q8NH76 319 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TMEM170AQ8WVE7 144 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 NUDCD2Q8WVJ2 157 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 BSCL2Q96G97 398 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 HARBI1Q96MB7 349 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 GPR82Q96P67 336 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SDHCQ99643 169 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 ASCL2Q99929 193 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 QTRT1Q9BXR0 403 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 NAA50Q9GZZ1 169 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 NARFLQ9H6Q4 476 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 COMMD3Q9UBI1 195 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 F11RQ9Y624 299 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1D-13A0A0B4J2D9 117 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 NDUFA4O00483 81 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 UPK1BO75841 260 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 RLN1P04808 185 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR8U9P0C7N5 309 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1-13P0DP09 117 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 CXCL2P19875 107 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 HTR2BP41595 481 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 CLDN12P56749 244 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 DEFA1P59665 94 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 DEFA3P59666 94 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 CX3CL1P78423 397 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 IL15RAQ13261 267 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 KLF5Q13887 457 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 ATP6V1FQ16864 119 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TATDN3Q17R31 274 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 BRD3OSQ6XYD6 125 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SSX9Q7RTT3 188 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SELENOHQ8IZQ5 122 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 Q8N402 240 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 MAPKAPK5-AS1Q8N8E1 139 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 THAP8Q8NA92 274 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR4C16Q8NGL9 310 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 COQ8AQ8NI60 647 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 MITD1Q8WV92 249 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 EEF1AKMT3Q96AZ1 226 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 R3HDM4Q96D70 268 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SMIM8Q96KF7 97 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 ST6GALNAC5Q9BVH7 336 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 RNF167Q9H6Y7 350 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 ZNF581Q9P0T4 197 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 METTL1Q9UBP6 276 aaKnown RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 DMRT1Q9Y5R6 373 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TET2Q6N021 2002 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 HSPG2P98160 4391 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 HRNRQ86YZ3 2850 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 DNAH6Q9C0G6 4158 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C13orf42A0A1B0GVH6 325 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SERTM2A0A1B0GWG4 89 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 IGLC7A0M8Q6 106 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C7orf66A4D0T2 115 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 DPPA5A6NC42 116 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 LINC00473A8K010 186 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 LINC01619G3V211 115 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 H0Y8G0 127 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms