RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 GBGT1Q8N5D6 347 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 PINX1Q96BK5 328 aaKnown RBP8.98□□□□□ -0.97
SNHG4-208ENST00000514110 CSTL1Q9H114 145 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 SCPEP1Q9HB40 452 aa8.98□□□□□ -0.97
SNHG4-208ENST00000514110 A0A087WXM4 84 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 TRAV14DV4A0A0A6YYC5 116 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 SMIM31A0A1B0GVY4 71 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 M0QYG6 137 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 APOHP02749 345 aaPredicted RBP8.97□□□□□ -0.97
SNHG4-208ENST00000514110 ELK1P19419 428 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 RCVRNP35243 200 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 NCS1P62166 190 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 LILRB2Q8N423 598 aa8.97□□□□□ -0.97
SNHG4-208ENST00000514110 C6orf62Q9GZU0 229 aaPredicted RBP8.97□□□□□ -0.97
SNHG4-208ENST00000514110 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
SNHG4-208ENST00000514110 GNG7O60262 68 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 HPGDSO60760 199 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 PI3P19957 117 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 CMC4P56277 68 aaPredicted RBP8.96□□□□□ -0.98
SNHG4-208ENST00000514110 VBP1P61758 197 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 ERHP84090 104 aaKnown RBP8.96□□□□□ -0.98
SNHG4-208ENST00000514110 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 TCF24Q7RTU0 167 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 RPP25LQ8N5L8 163 aaKnown RBP8.96□□□□□ -0.98
SNHG4-208ENST00000514110 TMEM217Q8N7C4 229 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 GATAD1Q8WUU5 269 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 PHLDA1Q8WV24 401 aaPredicted RBP8.96□□□□□ -0.98
SNHG4-208ENST00000514110 ST8SIA2Q92186 375 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 CMTM3Q96MX0 182 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 VSIRQ9H7M9 311 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 VCX3AQ9NNX9 186 aa8.96□□□□□ -0.98
SNHG4-208ENST00000514110 A0A0B4J293 547 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 IGHV3-66A0A0C4DH42 116 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 MPTX1A8MV57 137 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 P0C879 139 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 RNASE12Q5GAN4 147 aaKnown RBP8.95□□□□□ -0.98
SNHG4-208ENST00000514110 TP53RKQ96S44 253 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 RARRES2Q99969 163 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 FUNDC2Q9BWH2 189 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 MS4A6AQ9H2W1 248 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
SNHG4-208ENST00000514110 A0A1B0GU03 582 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 DEDDO75618 318 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 DFFBO76075 338 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 TNFAIP8O95379 198 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 PGAM2P15259 253 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
SNHG4-208ENST00000514110 RND3P61587 244 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 LHFPL1Q86WI0 220 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 FAM24BQ8N5W8 94 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 SLC35G3Q8N808 338 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 DUSP18Q8NEJ0 188 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 OR11H2Q8NH07 326 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 GINS3Q9BRX5 216 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 KLK11Q9UBX7 282 aa8.94□□□□□ -0.98
SNHG4-208ENST00000514110 PUS1Q9Y606 427 aaKnown RBP eCLIP8.94□□□□□ -0.98
SNHG4-208ENST00000514110 INS-IGF2F8WCM5 200 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 DNASE2O00115 360 aaPredicted RBP8.93□□□□□ -0.98
SNHG4-208ENST00000514110 TMEM50AO95807 157 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 CA1P00915 261 aaPredicted RBP8.93□□□□□ -0.98
SNHG4-208ENST00000514110 CD5P06127 495 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 RNASE2P10153 161 aaKnown RBP8.93□□□□□ -0.98
SNHG4-208ENST00000514110 SNCAP37840 140 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 NPBWR1P48145 328 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 PIGPP57054 158 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 DEFB131AP59861 70 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 PAFAH1B2P68402 229 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 LEMD1Q68G75 181 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 PVRIGQ6DKI7 326 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 ZNF600Q6ZNG1 722 aa8.93□□□□□ -0.98
SNHG4-208ENST00000514110 ZNF486Q96H40 463 aaPredicted RBP8.93□□□□□ -0.98
SNHG4-208ENST00000514110 C11orf68Q9H3H3 251 aaKnown RBP8.93□□□□□ -0.98
SNHG4-208ENST00000514110 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
SNHG4-208ENST00000514110 A0A0G2JRQ6 117 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 C3orf85A0A1B0GTC6 90 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 FAM25AB3EWG3 89 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 FAM25CB3EWG5 89 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 FAM25GB3EWG6 89 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 DEFB4AO15263 64 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 IFNA17P01571 189 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 CD3DP04234 171 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 ETV6P41212 452 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 AKR1C2P52895 323 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 PPP5CP53041 499 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 RPL11P62913 178 aaKnown RBP8.92□□□□□ -0.98
SNHG4-208ENST00000514110 MLANAQ16655 118 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 SP6Q3SY56 376 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 RNASE10Q5GAN6 216 aaKnown RBP8.92□□□□□ -0.98
SNHG4-208ENST00000514110 LGALS9CQ6DKI2 356 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 OR4D10Q8NGI6 311 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 OR52I2Q8NH67 350 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 NAA50Q9GZZ1 169 aaKnown RBP8.92□□□□□ -0.98
SNHG4-208ENST00000514110 FNDC4Q9H6D8 234 aaPredicted RBP8.92□□□□□ -0.98
SNHG4-208ENST00000514110 FBXL17Q9UF56 701 aa8.92□□□□□ -0.98
SNHG4-208ENST00000514110 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
SNHG4-208ENST00000514110 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms