RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 NOXA1Q86UR1 476 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 MISP3Q96FF7 219 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 HEYLQ9NQ87 328 aaPredicted RBP11.52□□□□□ -0.57
RNF4-210ENST00000508235 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 HSPB7Q9UBY9 170 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 FAM90A26D6RGX4 464 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 BMPR1BO00238 502 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 MED6O75586 246 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 CLEC3BP05452 202 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 HOXB5P09067 269 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 ACSM6Q6P461 480 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 SCARB1Q8WTV0 552 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 MITD1Q8WV92 249 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 OR4C12Q96R67 309 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 PEMTQ9UBM1 199 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 S4R3C0 116 aa11.51□□□□□ -0.57
RNF4-210ENST00000508235 PPP5D1E7EU14 171 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 K7EIM0 57 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 PITX3O75364 302 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 NXPH3O95157 252 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
RNF4-210ENST00000508235 SYNJ2BPP57105 145 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 IFITM3Q01628 133 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 EGFEM1PQ0D2K5 195 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 BSXQ3C1V8 233 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 SPSB3Q6PJ21 355 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 PLET1Q6UQ28 207 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 GPHB5Q86YW7 130 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 PINX1Q96BK5 328 aaKnown RBP11.5□□□□□ -0.57
RNF4-210ENST00000508235 BSCL2Q96G97 398 aaPredicted RBP11.5□□□□□ -0.57
RNF4-210ENST00000508235 TXN2Q99757 166 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 VWFP04275 2813 aa11.5□□□□□ -0.57
RNF4-210ENST00000508235 MGAM2Q2M2H8 2515 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 I3L2K1 104 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 SAP30O75446 220 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 LY86O95711 162 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 MT-CO2P00403 227 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 GPR183P32249 361 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 MFAP4P55083 255 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 ATP5IP56385 69 aaPredicted RBP11.49□□□□□ -0.57
RNF4-210ENST00000508235 DEFA6Q01524 100 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 Q56UQ5 140 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 PVRIGQ6DKI7 326 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 DUSP18Q8NEJ0 188 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 DTD1Q8TEA8 209 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 ZNF431Q8TF32 576 aaPredicted RBP11.49□□□□□ -0.57
RNF4-210ENST00000508235 RBKSQ9H477 322 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 U3KQ87 197 aa11.49□□□□□ -0.57
RNF4-210ENST00000508235 PKD1L1Q8TDX9 2849 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 RPS10-NUDT3A0A1W2PQS6 291 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 LGALS9O00182 355 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 TGOLN2O43493 480 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 OR2C1O95371 312 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
RNF4-210ENST00000508235 OPRK1P41145 380 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 OR52B4Q8NGK2 314 aa11.48□□□□□ -0.57
RNF4-210ENST00000508235 RNASEH2CQ8TDP1 164 aaKnown RBP11.48□□□□□ -0.57
RNF4-210ENST00000508235 CIB3Q96Q77 187 aaPredicted RBP11.48□□□□□ -0.57
RNF4-210ENST00000508235 GPN1Q9HCN4 374 aaPredicted RBP11.48□□□□□ -0.57
RNF4-210ENST00000508235 IGHV3-21A0A0B4J1V1 117 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 OR2T8A6NH00 312 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 NUPL2O15504 423 aaKnown RBP11.47□□□□□ -0.57
RNF4-210ENST00000508235 GNG7O60262 68 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 SCGB2A1O75556 95 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 ADAP1O75689 374 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 IFNA10P01566 189 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 NPY1RP25929 384 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 NPBWR1P48145 328 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 RPP30P78346 268 aaKnown RBP11.47□□□□□ -0.57
RNF4-210ENST00000508235 ETFRF1Q6IPR1 90 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 SIGLEC8Q9NYZ4 499 aa11.47□□□□□ -0.57
RNF4-210ENST00000508235 TRRAPQ9Y4A5 3859 aa11.46□□□□□ -0.57
RNF4-210ENST00000508235 PRAF2O60831 178 aa11.46□□□□□ -0.57
RNF4-210ENST00000508235 IL5P05113 134 aa11.46□□□□□ -0.57
RNF4-210ENST00000508235 RELQ04864 619 aaPredicted RBP11.46□□□□□ -0.57
RNF4-210ENST00000508235 NRARPQ7Z6K4 114 aa11.46□□□□□ -0.57
RNF4-210ENST00000508235 SEC22CQ9BRL7 303 aa11.46□□□□□ -0.57
RNF4-210ENST00000508235 PALMDQ9NP74 551 aa11.46□□□□□ -0.57
RNF4-210ENST00000508235 NOTCH3Q9UM47 2321 aa11.46□□□□□ -0.58
RNF4-210ENST00000508235 FBN3Q75N90 2809 aa11.45□□□□□ -0.58
RNF4-210ENST00000508235 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
RNF4-210ENST00000508235 WRBO00258 174 aa11.45□□□□□ -0.58
RNF4-210ENST00000508235 SYNGR2O43760 224 aa11.45□□□□□ -0.58
RNF4-210ENST00000508235 SLC25A4P12235 298 aa11.45□□□□□ -0.58
RNF4-210ENST00000508235 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
RNF4-210ENST00000508235 C12orf45Q8N5I9 185 aaPredicted RBP11.45□□□□□ -0.58
RNF4-210ENST00000508235 ZNF436Q9C0F3 470 aaPredicted RBP11.45□□□□□ -0.58
RNF4-210ENST00000508235 ZC4H2Q9NQZ6 224 aa11.45□□□□□ -0.58
RNF4-210ENST00000508235 A8MWP6 167 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 F8W735 103 aaPredicted RBP11.44□□□□□ -0.58
RNF4-210ENST00000508235 INMT-MINDY4F8WBC2 141 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms